Detailed information of gene28085.t1 in Actinoscyphia liui

Genomic Location: chr9:8544903...8562911
NR annotation: CAH3181606.1, unnamed protein product [Porites lobata]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000239 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12012
all species →
DUF3504Domain of unknown function (DUF3504)FamilyInterproscan
PF03160
all species →
Calx-betaCalx-beta domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038081
all species →
Homologous_superfamilyCalX-like domain superfamilyInterproscan
IPR011010
all species →
Homologous_superfamilyDNA breaking-rejoining enzyme, catalytic coreInterproscan
IPR021893
all species →
DomainDomain of unknown function DUF3504Interproscan
IPR042838
all species →
FamilyUncharacterized protein KIAA1958Interproscan
IPR003644
all species →
DomainNa-Ca exchanger/integrin-beta4Interproscan
IPR013762
all species →
Homologous_superfamilyIntegrase-like, catalytic domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46963
all species →
SIMILAR TO RIKEN CDNA E130308A19Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →
Molecular FunctionDNA bindingInterproscan
GO:0007154
all species →
Biological Processcell communicationInterproscan
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0006310
all species →
Biological ProcessDNA recombinationInterproscan
GO:0015074
all species →
Biological ProcessDNA integrationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene28085.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP