Detailed information of gene28149.t1 in Actinoscyphia liui

Genomic Location: chr9:9532943...9534367
NR annotation: KXJ22674.1, Deleted in malignant brain tumors 1 protein [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q95218Scavenger receptor cysteine-rich domain-containing protein DMBT1 OS=Oryctolagus cuniculus OX=9986 GN=Dmbt1 PE=1 SV=2
O08762Neurotrypsin OS=Mus musculus OX=10090 GN=Prss12 PE=1 SV=1
Q5G269Neurotrypsin OS=Pongo pygmaeus OX=9600 GN=PRSS12 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000099 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00530
all species →		SRCRScavenger receptor cysteine-rich domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050912
all species →		FamilyLysyl oxidase-like proteinInterproscan
IPR036772
all species →		Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR017448
all species →		DomainSRCR-like domainInterproscan
IPR001190
all species →		DomainSRCR domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45817
all species →		LYSYL OXIDASE-LIKE-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004720
all species →		Molecular Functionprotein-lysine 6-oxidase activityInterproscan
GO:0005615
all species →		Cellular Componentextracellular spaceInterproscan
GO:0018057
all species →		Biological Processpeptidyl-lysine oxidationInterproscan
GO:0030199
all species →		Biological Processcollagen fibril organizationInterproscan
GO:0062023
all species →		Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene28149.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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