Detailed information of gene28303.t1 in Actinoscyphia liui

Genomic Location: chr9:12510003...12512012
NR annotation: KXJ19643.1, Protein NLRC3 [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9HC29Nucleotide-binding oligomerization domain-containing protein 2 OS=Homo sapiens OX=9606 GN=NOD2 PE=1 SV=1
Q53B88Nucleotide-binding oligomerization domain-containing protein 2 OS=Hylobates lar OX=9580 GN=NOD2 PE=3 SV=1
Q53B87Nucleotide-binding oligomerization domain-containing protein 2 OS=Pan troglodytes OX=9598 GN=NOD2 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000076 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13516
all species →
LRR_6Leucine Rich repeatRepeatInterproscan
PF05729
all species →
NACHTNACHT domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR051261
all species →
FamilyNOD-like receptor (NLR)Interproscan
IPR001611
all species →
RepeatLeucine-rich repeatInterproscan
IPR032675
all species →
Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR007111
all species →
DomainNACHT nucleoside triphosphataseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24106
all species →
NACHT, LRR AND CARD DOMAINS-CONTAININGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene28303.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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