Gene detail

Detailed information of gene28352.t1 in Actinoscyphia liui

Genomic Location: chr9:13636602...13637915
NR annotation: XP_028516237.1, vesicular inhibitory amino acid transporter [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P47082	Vacuolar amino acid transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=AVT1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0017259 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01490 all species →	Aa_trans	Transmembrane amino acid transporter protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013057 all species →	Domain	Amino acid transporter, transmembrane domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22950 all species →	AMINO ACID TRANSPORTER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003333 all species →	Biological Process	amino acid transmembrane transport	Interproscan
GO:0005774 all species →	Cellular Component	vacuolar membrane	Interproscan
GO:0015179 all species →	Molecular Function	L-amino acid transmembrane transporter activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15015	SLC32A, VGAT; solute carrier family 32 (vesicular inhibitory amino acid transporter)	-	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.