Detailed information of gene28738.t1 in Actinoscyphia liui

Genomic Location: chr10:399725...418409
NR annotation: XP_031565232.1, uncharacterized protein LOC116300495 [Actinia tenebrosa]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P32018Collagen alpha-1(XIV) chain OS=Gallus gallus OX=9031 GN=COL14A1 PE=1 SV=2
Q8C6K9Collagen alpha-6(VI) chain OS=Mus musculus OX=10090 GN=Col6a6 PE=1 SV=2
A6NMZ7Collagen alpha-6(VI) chain OS=Homo sapiens OX=9606 GN=COL6A6 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000544 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00092
all species →		VWAvon Willebrand factor type A domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036465
all species →		Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR002035
all species →		Domainvon Willebrand factor, type AInterproscan
IPR052229
all species →		FamilyCollagen VI and Biomineralization Protein PIFInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22588
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
No Gene Ontology signature was detected for gene28738.t1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene28738.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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