Detailed information of gene29043.t1 in Actinoscyphia liui

Genomic Location: chr10:5883621...5899240
NR annotation: XP_031563461.1, tRNA wybutosine-synthesizing protein 5-like [Actinia tenebrosa]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
E1C7T6tRNA wybutosine-synthesizing protein 5 OS=Gallus gallus OX=9031 GN=TYW5 PE=3 SV=1
A2RUC4tRNA wybutosine-synthesizing protein 5 OS=Homo sapiens OX=9606 GN=TYW5 PE=1 SV=1
F4K2M8Lysine-specific demethylase JMJ31 OS=Arabidopsis thaliana OX=3702 GN=JMJ31 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000764 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13621
all species →
Cupin_8Cupin-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003347
all species →
DomainJmjC domainInterproscan
IPR041667
all species →
DomainCupin-like domain 8Interproscan
IPR014710
all species →
Homologous_superfamilyRmlC-like jelly roll foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12461
all species →
HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016706
all species →
Molecular Function2-oxoglutarate-dependent dioxygenase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene29043.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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