Gene detail

Detailed information of gene29147.t1 in Actinoscyphia liui

Genomic Location: chr10:7889340...7892500
NR annotation: XP_020910606.1, metabotropic glutamate receptor 3 isoform X1 [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

gene29147.t1

GTAGCGTCCTAGTCGATACATTTCAATGAAATATCTCTAAAATGGAGAAAAAACTTCATAAGTTCTTCTTTTCCATGTTTATCCTTTCTGTTCTAAGGAAGTTAGCTTTTTCGATGTCTATTTTAGACAATTCTTTGAGCAAAGATGGCGATATTATTTTTGGAGCATTGCTCCCAATTTATCGAAAAGACAACAATGGAGATTGCAAAGTTTTCAACAAGGATGCACTTGTGTGGATGAAAGCTTTACGTTTAGCCTTACACGACCTCGAAAGTACGCAGAATCCAGCTCTCCAAAACGCAACTTTTGGCTTTCGCATTCAAGACACTTGTCAGAAGTCTGCTCTTGACCAAGCTTTGGACTTTGTACATGGCAGCAAAGTTAACGCGCCTTGCAACCCATCCCAGAAGAAAATAATTGCTGTTCTTTCAAGTGAATATGATCAAGACTCCTCAACTCTACTCAGCCTCTTCAAGATTCCAAATATGATATTCGCAGACTTCGATGTTGGCGAATTTGGAACATTTCCAGTGGAGCATAATTACAATTTCGAGGCTCTGAAATTAAGTTTCTACAGAGCGAAGGCCGTAGTTGGTTTGATAAAACAATTCCACTGGGATTCTGTATTTGTAGTTGTGCAGAATGACTATCGTAAAGAGTATCTTATTTTCCGAGAACTTGCAGAGATGGATGGCATATGCATTGCTGGTACTGTAGAGGGATATCAGAAAATAGTGAGCAAGATAGGACGAAGAGTGGAAATACGAACTGTTCTTCTATTCATCGATGGTAGTGACATGCTGAACGCTGTGAAAACCATGAAAAGCATACGTCCTTCTCATTACACATGGATTGACGTCACCGGAAGTACTCGTGATATGACGTCACAATTTATAATGACGGGCGAAGTCATTCTCAGCCTCTCTCCAGAGGTCAAATTTCTTAATGAACTTCGAAAATATGGCTCTTCAGAATGTAGACATGAAATTGCTTCAAACGAACTCGATGGAATCTTTTGTAAAATTGAAGAGTCAAGTAACAAAGTCTTAGAAGAAATTGATGACAGTTTGACTTCTAAGAAAACGTTTTCTTCTCGCGCAAGTATCGCTCATGCTCGTACGAGAGATATCCAAGGCATGTTCAATGGCGTTGTTACCATTGGGAAAGCTTTAGCTCGCCATATGCAAACCTCGTGTTGCGACAAAACCAAGGAAGATTGCTTGGATGCTCTCTCCAGCAAGGATCTTGCAAACGAACTCAAAGTCTTGACCAGGAAGCAGTTCCTGGAAATTACAGCCCACCAAAAACCTTTTTTAAAGGAAAATATGTTTTCCCTCGTGAATATCCATGGTAACGACTCTAGTCCACGTGAAGTCGGTACATGGGAAAAGACATGGTTTATCAATCGGGCGGGAATCCGCTGGCCAGGAAGATCCTCGGACATTCCCATGTCTACATGTAGTCCAACATGCCCCGCGGGCCACGTTCAAGTCGCAGAGGAAGGCCGCAAGTGTTGCTGGTCTTGCCAGGCTTGTAGTTACAATCAGTTCATAACAGACAACTACACATGCATAGACTGTGTTCGCGGGCATTGGCCATCCAAAGATTATCGTTTTTGTGAATTTAACATACAGATTACAATCGTGTCATGCGCAGTTGCAATCTCAAGTGTATCTGCAGTTTTGTATTCTCTGGTTTTATAGAAATGTGAAGTATTTTAGTTTATTTTAGTTTACGATGCTTTTTACCACATACGTGGTAGGGTCGCACACATGCAACAGAGCGAGGCTCCAATTTAAGTGTGGCCCTATGGATAAATAGACCACACACCGCGGGAACTCAGTTCAATGGCCTCGAGATACTCCTAAAATAAGCAAACATGGATTTGCTGCTGCAAATAGGCCCTGGTCCCTGCTGGTATCGGTTCCTCGAAAAGTGGATAGCAGTGTTCATCAGACTGTAGAAGAATAAGTTATCCGACTGTTACCTAACCACCACTGCTCCACCCTTTGTGCAGCCGGGGCCTGCTTAGAATTAATAATTTAGTTAGTGAAAATTGTAAATCGAGGGTTTGTAGAAATGTAGGGATATCTGAAATTGCACAGGATTACAATTATATTTGTAATATTTTCAAGAGACCACAACTCGAGTACTG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9QYS2	Metabotropic glutamate receptor 3 OS=Mus musculus OX=10090 GN=Grm3 PE=1 SV=1
P31422	Metabotropic glutamate receptor 3 OS=Rattus norvegicus OX=10116 GN=Grm3 PE=1 SV=1
Q14832	Metabotropic glutamate receptor 3 OS=Homo sapiens OX=9606 GN=GRM3 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0010460 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07562 all species →	NCD3G	Nine Cysteines Domain of family 3 GPCR	Family	Interproscan
PF01094 all species →	ANF_receptor	Receptor family ligand binding region	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000337 all species →	Family	GPCR, family 3	Interproscan
IPR011500 all species →	Domain	GPCR, family 3, nine cysteines domain	Interproscan
IPR028082 all species →	Homologous_superfamily	Periplasmic binding protein-like I	Interproscan
IPR038550 all species →	Homologous_superfamily	GPCR, family 3, nine cysteines domain superfamily	Interproscan
IPR050726 all species →	Family	Metabotropic Glutamate Receptor	Interproscan
IPR001828 all species →	Domain	Receptor, ligand binding region	Interproscan
IPR017979 all species →	Conserved_site	GPCR, family 3, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24060 all species →	METABOTROPIC GLUTAMATE RECEPTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0001640 all species →	Molecular Function	adenylate cyclase inhibiting G protein-coupled glutamate receptor activity	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007216 all species →	Biological Process	G protein-coupled glutamate receptor signaling pathway	Interproscan
GO:0051966 all species →	Biological Process	regulation of synaptic transmission, glutamatergic	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for gene29147.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.