Detailed information of gene29246.t1 in Actinoscyphia liui

Genomic Location: chr10:10000584...10009045
NR annotation: KXJ05839.1, Importin subunit alpha-1, partial [Exaiptasia diaphana]
Species abbreviation ALIUI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O80480Importin subunit alpha-4 OS=Arabidopsis thaliana OX=3702 GN=IMPA4 PE=1 SV=1
O04294Importin subunit alpha-3 OS=Arabidopsis thaliana OX=3702 GN=IMPA3 PE=1 SV=2
Q9SLX0Importin subunit alpha-1b OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0155601 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001150 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00514
all species →
ArmArmadillo/beta-catenin-like repeatRepeatInterproscan
PF16186
all species →
Arm_3Atypical Arm repeat RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000225
all species →
RepeatArmadilloInterproscan
IPR016024
all species →
Homologous_superfamilyArmadillo-type foldInterproscan
IPR032413
all species →
RepeatAtypical Arm repeatInterproscan
IPR011989
all species →
Homologous_superfamilyArmadillo-like helicalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23316
all species →
IMPORTIN ALPHAInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0006607
all species →
Biological ProcessNLS-bearing protein import into nucleusInterproscan
GO:0008139
all species →
Molecular Functionnuclear localization sequence bindingInterproscan
GO:0061608
all species →
Molecular Functionnuclear import signal receptor activityInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene29246.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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