Detailed information of gene29471.t1 in Actinoscyphia liui

Genomic Location: chr10:14319033...14319428
NR annotation: XP_020910341.1, actin-depolymerizing factor 7 [Exaiptasia diaphana]
Species abbreviation ALIUI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
C4LVG4Actophorin OS=Entamoeba histolytica (strain ATCC 30459 / HM-1:IMSS / ABRM) OX=294381 GN=ACTO PE=1 SV=1
Q07749Actin-depolymerizing factor 2, isoform c OS=Caenorhabditis elegans OX=6239 GN=unc-60 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0012188 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00241
all species →
Cofilin_ADFCofilin/tropomyosin-type actin-binding proteinDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002108
all species →
DomainActin-depolymerising factor homology domainInterproscan
IPR029006
all species →
Homologous_superfamilyADF-H/Gelsolin-like domain superfamilyInterproscan
IPR017904
all species →
FamilyADF/CofilinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11913
all species →
COFILIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003779
all species →
Molecular Functionactin bindingInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0015629
all species →
Cellular Componentactin cytoskeletonInterproscan
GO:0030042
all species →
Biological Processactin filament depolymerizationInterproscan
GO:0051015
all species →
Molecular Functionactin filament bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene29471.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP