Detailed information of gene29509.t1 in Actinoscyphia liui

Genomic Location: chr10:15054124...15137654
NR annotation: XP_031556520.1, vacuolar protein sorting-associated protein 13A-like [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q96RL7Intermembrane lipid transfer protein VPS13A OS=Homo sapiens OX=9606 GN=VPS13A PE=1 SV=2
Q9BGZ0Intermembrane lipid transfer protein VPS13A OS=Macaca fascicularis OX=9541 GN=VPS13A PE=2 SV=2
A1Z713Intermembrane lipid transfer protein Vps13 OS=Drosophila melanogaster OX=7227 GN=Vps13 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16909VPS13_DH-likeVacuolar-sorting-associated 13 protein, DH-like domainFamilyInterproscan
PF01498HTH_Tnp_Tc3_2TransposaseFamilyInterproscan
PF06650VPS13_VABVacuolar-sorting associated protein 13, adaptor binding domainDomainInterproscan
PF12624Chorein_NVPS13-like, N-terminalDomainInterproscan
PF16908VPS13_ext_choreinVacuolar sorting-associated protein 13, extended-choreinRepeatInterproscan
PF16910VPS13_mid_rptVPS13, central RBG modulesRepeatInterproscan
PF21679VPS13_CIntermembrane lipid transfer protein VPS13, C-terminalDomainInterproscan
PF09333ATG2-VPS13_CATG2/VPS13, C terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR031645DomainVacuolar protein sorting-associated protein 13, DH-like domainInterproscan
IPR002492DomainTransposase, Tc1-likeInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR009543DomainVacuolar protein sorting-associated protein 13, VPS13 adaptor binding domainInterproscan
IPR026854DomainVacuolar protein sorting-associated protein 13-like, N-terminal domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR031646DomainVacuolar protein sorting-associated protein 13, extended choreinInterproscan
IPR031642DomainVPS13, middle RBG modulesInterproscan
IPR049424DomainIntermembrane lipid transfer protein VPS13, C-terminalInterproscan
IPR026847FamilyVacuolar protein sorting-associated protein 13Interproscan
IPR015412DomainAtg2/VPS13, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16166VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006313Biological ProcessDNA transpositionInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0006623Biological Processprotein targeting to vacuoleInterproscan
GO:0019898Cellular Componentextrinsic component of membraneInterproscan
GO:0045053Biological Processprotein retention in Golgi apparatusInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K19525VPS13A_C; vacuolar protein sorting-associated protein 13A/C-Membrane traffickingko04131deepkoala

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