Detailed information of gene29578.t2 in Actinoscyphia liui

Genomic Location: chr10:16382141...16404152
NR annotation: XP_028515891.1, utrophin [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P46939Utrophin OS=Homo sapiens OX=9606 GN=UTRN PE=1 SV=2
G3V7L1Utrophin OS=Rattus norvegicus OX=10116 GN=Utrn PE=1 SV=3
P11531Dystrophin OS=Mus musculus OX=10090 GN=Dmd PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00307CHCalponin homology (CH) domainDomainInterproscan
PF00435SpectrinSpectrin repeatDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018159RepeatSpectrin/alpha-actininInterproscan
IPR001715DomainCalponin homology domainInterproscan
IPR036872Homologous_superfamilyCH domain superfamilyInterproscan
IPR002017RepeatSpectrin repeatInterproscan
IPR001589Conserved_siteActinin-type actin-binding domain, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11915SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0030036Biological Processactin cytoskeleton organizationInterproscan
GO:0030054Cellular Componentcell junctionInterproscan
GO:0030864Cellular Componentcortical actin cytoskeletonInterproscan
GO:0042995Cellular Componentcell projectionInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11547NDC80, HEC1, TID3; kinetochore protein NDC80-Chromosome and associated proteinsko03036deepkoala

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