Genomic Location: chr10:17395653...17399664
NR annotation: WP_018963422.1, MULTISPECIES: cold-shock protein [Coprothermobacter]
Species Actinoscyphia liui · all data for this species · gene families
| CDS |
| gene29638.t1 |
| Transcript |
| gene29638.t1 |
| Protein |
| gene29638.t1 |
| UniProt accession | Description |
|---|---|
| P63237 | Cold shock-like protein CspE OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) OX=107806 GN=cspE PE=3 SV=2 |
| P63238 | Cold shock-like protein CspE OS=Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) OX=198804 GN=cspE PE=3 SV=2 |
| Q89A90 | Cold shock-like protein CspE OS=Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp) OX=224915 GN=cspE PE=3 SV=3 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0002110 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00313 all species → | CSD | 'Cold-shock' DNA-binding domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002059 all species → | Domain | Cold-shock protein, DNA-binding | Interproscan |
| IPR012340 all species → | Homologous_superfamily | Nucleic acid-binding, OB-fold | Interproscan |
| IPR050181 all species → | Family | Cold shock domain-containing protein | Interproscan |
| IPR011129 all species → | Domain | Cold shock domain | Interproscan |
| IPR019844 all species → | Domain | Cold-shock (CSD) domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11544 all species → | COLD SHOCK DOMAIN CONTAINING PROTEINS | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003676 all species → | Molecular Function | nucleic acid binding | Interproscan |
| GO:0010468 all species → | Biological Process | regulation of gene expression | Interproscan |
gene29638.t1.
