Detailed information of gene29714.t1 in Actinoscyphia liui

Genomic Location: chr10:18675146...18691442
NR annotation: GBL55206.1, Transposon Ty3-I Gag-Pol polyprotein, partial [Araneus ventricosus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
E7FA21Guanine nucleotide exchange protein smcr8a OS=Danio rerio OX=7955 GN=smcr8a PE=3 SV=1
Q3UMB5Guanine nucleotide exchange protein SMCR8 OS=Mus musculus OX=10090 GN=Smcr8 PE=1 SV=2
Q8TEV9Guanine nucleotide exchange protein SMCR8 OS=Homo sapiens OX=9606 GN=SMCR8 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00665rveIntegrase core domainDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF11704FolliculinVesicle coat protein involved in Golgi to plasma membrane transportFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR037521DomainFolliculin/SMCR8, tripartite DENN domainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR052160FamilyGypsy Retrotransposon Integrase-likeInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR037520DomainFolliculin/SMCR8, longin domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47266ENDONUCLEASE-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0005096Molecular FunctionGTPase activator activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

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