Detailed information of gene29750.t1 in Actinoscyphia liui

Genomic Location: chr10:19501350...19527632
NR annotation: XP_020912182.1, uncharacterized protein LOC110249945 [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B3EWZ5MAM and LDL-receptor class A domain-containing protein 1 (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1
B3EWZ6MAM and LDL-receptor class A domain-containing protein 2 (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003792 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00008
all species →		EGFEGF-like domainDomainInterproscan
PF00754
all species →		F5_F8_type_CF5/8 type C domainDomainInterproscan
PF07974
all species →		EGF_2EGF-like domainDomainInterproscan
PF00053
all species →		Laminin_EGFLaminin EGF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742
all species →		DomainEGF-like domainInterproscan
IPR013320
all species →		Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR002049
all species →		DomainLaminin-type EGF domainInterproscan
IPR000998
all species →		DomainMAM domainInterproscan
IPR006212
all species →		RepeatFurin-like repeatInterproscan
IPR000421
all species →		DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR013111
all species →		DomainEGF-like domain, extracellularInterproscan
IPR042635
all species →		FamilyMEGF10/SREC1/2-likeInterproscan
IPR008979
all species →		Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24043
all species →		SCAVENGER RECEPTOR CLASS FInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0005044
all species →		Molecular Functionscavenger receptor activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene29750.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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