Gene detail

Detailed information of gene29975.t2 in Actinoscyphia liui

Genomic Location: chr10:22649715...22659289
NR annotation: XP_020912219.1, FGFR1 oncogene partner isoform X1 [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q4R7V3	Centrosomal protein 43 OS=Macaca fascicularis OX=9541 GN=CEP43 PE=2 SV=1
Q4V7C1	Centrosomal protein 43 OS=Rattus norvegicus OX=10116 GN=Cep43 PE=1 SV=1
O95684	Centrosomal protein 43 OS=Homo sapiens OX=9606 GN=CEP43 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003489 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09398 all species →	FOP_dimer	FOP N terminal dimerisation domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018993 all species →	Domain	FGFR1 oncogene partner (FOP), N-terminal dimerisation domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15431 all species →	FGFR1 ONCOGENE PARTNER/LISH DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005813 all species →	Cellular Component	centrosome	Interproscan
GO:0005815 all species →	Cellular Component	microtubule organizing center	Interproscan
GO:0034453 all species →	Biological Process	microtubule anchoring	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16546	FGFR10P; FGFR1 oncogene partner	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.