Gene detail

Detailed information of gfas1.m1.11262.m1 in Galaxea fascicularis

Genomic Location: Sc0001455:21371...31176
NR annotation: CAH3193598.1, unnamed protein product [Porites evermanni]
Species Galaxea fascicularis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

gfas1.m1.11262.m1

AGGAATTACCTGAACATGAAAAGGAAGTTTATCAAGAGATGGCTCGTCAAGATAAGGCAAACAAAAAGTATCGACCTGCTCGGAATGATAGAATGGACTGTATGGGAGAGTATATCTCGAAACGTGTGGACACAGTCAGCCTTAATGAGAAGAGACGAAAGGAGGAAAGAGAGGGGGTTAAAAGGGAATGGCTGCCAGGCAGAGCTGTCTGTGATGAGAGATTCTACATGGTTGCATTCATGTCTTATTATGATCTCCCTGATGATGGATATCTTCCTTGTGAAATTGGTGCAGTAGAATATTCCCTCAATGAAGGCATCTTAAGTAGTATGCATTACTTTATTCCACCAGGAGAACTCAAAGTTGGCCTTCGATACACGGCTATGAGTACAAGTGAAAGAACACACCAGATTCCTGTTGAAGGTTTAGCAAAGAAAGGAGACACATATCGTAAGATCTGGCTTGATCTTTTACGATTTGTTAATCCTGAGCAAACAGCCTTATTTCCACCTGTTTACTGTCGGATTTCAGAAACAAAGCAAACAGAATTCTGCCTGCAATATTTGGCAAAGAAAGCTGAGATGCCAAACAAACTGAAGAAGGTGTATGAACTGGAAGGGCTTGTGTGTGATTTACATGCACACTTCACTGCAGAATCAGGAAGTGCCATGGGAATCTCAAAATCAAAGGCAACAGAGCTTATTTCCAGTACCATCTTTGATTATGAACCTAATACAAGATGTGAATGGCATGAAAAAAATGAAGTAAAATTTTGTGCTCTGGGAACAGTTCAGCGTTATTGCTACTGCTTGTCAGATTTTCTGTGTTCAGTTTATGGCATTCCGCTTACTGAAAATCATTTACCTGAGAGACCTGAAGGGTCCTTTGGCACCGTGATCAAAGCACCAGAAAACAGCTGGTCATCACAGGAGGAGACACACCCTAGAGGTTCAAGACGATCCGAGGAAGATAATGGACCCTTTGCTGCGAGAGACTATCGTTACTATCGTGGAGGGGCAAGCAGTGAAGGTTCAACAAGTGGATACACTCGCTCTGGCCCCACTTACGATCAACAGAGTCTTCACAGGTACACACCCCCACAGGCTTCAGGAGCCACTTCTGCCTGGCAGTTTCCATCAAAGACCTCCCAGCCTCCACAGCCTTCATTTGGATTTGGCGCAGGAAGAGGCCGTGGACGAGGCCGTGGTGTTCAACCTAGTCAACCTCTCCGACGACCGAACCTTCCTGGAATGGCTGCAGCTGCCAGTGCAGTCACTCAAGATTCATCTTGGAGCAGTGTTGTTGCCTCAGAGCTACATGGAGCTGCACCCGCTGCAGGAAACATACCAACATGGGCCGGAACAGAACCTCAACCACGCCCTGTGGGACGGGGGTTACGAGCCCCTGCCACTAAGCCAAAAGTATATGCTGGAGCAATGACTCCTCCTGCACCAGGACAAGCACCTATGCCACCTCTCACCTGGCAGATGCAGGCATGGCAAGGAGGGAGGGGTGTTGCTTCTCAGATTAATGCAATAAATTTGAATGGATAACAGTAAAGTTTGGATCTCCGTTAGCCCGCTGTGCCCTGAGTTAATATTTAAATCTCTGCTGTAAATATTTCTAATAATTTAAATCTACAGCTTCTTCCCTCAAATGTAGCAGAACTTGCTAGGCGCAAAAGCCTGGGATTTGGTCATCTAGAGTATACCTCTCCCAGATTTGTCTTGGAAATTCGAGAAAAAGCCTTTTGTTGGCTTCCTCATGCCATAAAATCATTAACCCATCTCCAAGTCTCTGAAGTTAACAATTTAATCCCTTCTTTAGTTAAATTTTATCATTTACCAATAATTTGAATGCTGTAAGCATAATAGCTAGTGAAAAGTTAGGTTCAATGTCTTCACCAAAAATGCTTTTCAATTCTTTGAATTAGTACAGTAAGTTGTAAAAGAAACTGGACTATTGGGCTTAGAGGGTAACATGTATCATGTTTGTACAACCTTTTTGACAAAACAATAGATATTTATTTTAGTGGGTGTGGGGCATGTTTATGTTCAGAGCCATGAACCCAGAGACTGTTGAAAAATGTTCCTGTTATGTTAGTTAACTTTATATAACATAATCCAACCAAACAAAGGTGATTTAAATTAGGACAGTCAAATTATATTCAAGAAATTAAAAGACCCTTATGCTCACTGCAAATCATTGTATGAAGTAATCAGAACTATAAGAATTTAAAATTTATATTCAGTATTATTTATGCTGGCTATTGTTGTCTTTACATCTGTCACAGAACAAAATACTATATTATCTTTCCATATGACAGTTTGTCAAATGAAACCTTGCTTTTAAGCGTTTATTTTGTTTAATATTTTCACTACAAGGGACCAAGTCATGCAGTTTCTGTCAGTTTTTTCAAAGTGGTCTTTGACCTCCCCACAAACAAAACAGCTAAGCAGAAGATTTCCGAGCTCTTAGAAAAACTGACCCAAACAAAAACTGGTTTTCGGCAAATTTTTACCAGATGTGTAGATAAACAGTTGTCAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q08D62	Protein maelstrom homolog OS=Xenopus tropicalis OX=8364 GN=mael PE=2 SV=1
A4UTQ0	Protein maelstrom homolog OS=Sus scrofa OX=9823 GN=MAEL PE=2 SV=1
Q96JY0	Protein maelstrom homolog OS=Homo sapiens OX=9606 GN=MAEL PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006787 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13017 all species →	Maelstrom	piRNA pathway germ-plasm component	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR024970 all species →	Domain	Maelstrom domain	Interproscan
IPR039259 all species →	Family	Protein maelstrom	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21358 all species →	PROTEIN MAELSTROM HOMOLOG	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0060964 all species →	Biological Process	regulation of miRNA-mediated gene silencing	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0007140 all species →	Biological Process	male meiotic nuclear division	Interproscan
GO:0007283 all species →	Biological Process	spermatogenesis	Interproscan
GO:0034587 all species →	Biological Process	piRNA processing	Interproscan
GO:0043186 all species →	Cellular Component	P granule	Interproscan
GO:0043565 all species →	Molecular Function	sequence-specific DNA binding	Interproscan
GO:0045892 all species →	Biological Process	negative regulation of DNA-templated transcription	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K18411	MAEL; protein maelstrom	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.