Gene detail

Detailed information of gfas1.m1.11955.m1 in Galaxea fascicularis

Genomic Location: Sc0001811:3513...6876
NR annotation: CAH3038217.1, unnamed protein product [Porites evermanni]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

gfas1.m1.11955.m1

ATGTCTGCAGAAAGTATTTCAACACCGGAAAAACAAGGAGACACGAAGTTATGTTTGCCACCGTCTTCACCTTTGGTTAAAGTGTGGGAATTTGTCACCACCTACTTCTTGGCGATTGGAATACTTGTAATCTTGATAACAGGATTGCAGTGGCCGTCATCAGGGACTTTTCTAGCTAATATTTATTTGCCATACATTTGCATCGCTTTGTCTTTCTTCTTGTGTGGCCTCCGCGTCAAAACAAACGAACTGCTTGCTGCTGTCAAGTCGTACAAGGCTATCGTATGGGGAATTCTGACCATTCTCTTAGTGATTCCGGTCACGGGGACTCAAATCACAAAGACTATTCAGTTTGCTACTCAGGTGGATGATAACTTAAACACTTCAGAGTCGATTGTAATTGGAAATATCACCGCTATTGGTCCCACCGAGTTCGCGTTCGCGTTGCAAGTGTTCTTTGTTGTGCCTGCAAGTATGTCAGCTGGTGCTATCTTGTCCTTGATAGCCGGTGGCAATTTTTCTCTCGCGATGTTACTGGTGGTGATAACAAATTGCGCTGCTGTGTTTACTGTGCCACCGATGCTGGTTTGGTTGACCGACCTCACCAGTAAAGTGAACGTCGCAAGATTTGGATTGATCATGCTCCTGTTCTTCCTTGTAATTGTACTTCCAACCATAATCGGCAAGTTGCTACGATTTGTACACGTTGTCGCCGAAAGAGTAGACTCATACGACAGAAGCATCCATTACACTATAATCACCCTATTTGTGCTCTCCACGTGGTGCGAAGTGAGTAAAGGGCAAGTTGAAGAAAAATTTAACAACATTATATCGATGAATATACTCATTATTGTTGGCTACTCCTCCATAATGCATATCATGTTTCTGCTGCTCAACTGGATCGCGGGCAGCTTTCTGGGCCTCGCTTTGCCCGCGAAAAAGACTATAGTGATCTTGGGAAGCCACAAAGCTTTGTCGTTTGCACTCCAGGTCATCAAGTTTCTGTCAACAGATGTAGGAAACCGAAGTCTCATGTTTATCGTTTGTATTATTACGTACTTGACTATACTTGTTCTGGATTCGGTCATCGTGTGCAGATGGGCCACAGTTACAGATGATGATGGGAAGGATGAGAATGAAAAGATGAAGGAGGGGAAATATGGAATGGTTCCTCAGGAAGATGACTGAGAAACGGGATGGGGATAATGAGGGAAAAAGTATCGATTAGTTGAGTTTTCAATAGTCTAAAATACAGATTAATGTCACAGCTAAATGACTAAATTGGGGAAGCTGAGTATTAGGCCTTACTTGCTTGAAGTGACGCAAAGGATGTAGGGGGGAGGGGTGGGATACAAAAGCCCTACACTCAGGTTGGGTAGAATAAGAATCGGCAGTGCGCATGACCGAGACCGATCTCAGGGAGAATGGAAAGGAAGACGGTGAAGAAATGTGCGATAACACAGAAAAATATAACTGAACTGAAGGGAAAGGGGGTCGAATATAGGAAAGACACTGACCGATCGCGTAGGGGAAGCGCTGTATTTGTCTAGGACCAAAGTGTTTGGAAAATTGAGTTGAAGGATTGCGCGCGTGCTGTGAAATAATTTTGACACATTTTTTGCGAAGAGAAAATCAATGTGACTTAGGACACACGAATGGAGTATTCCATAAAGAATGCTAGGATAACTAAATTTTTGCTCACTATAACTAATTTAATTGATGGGTACAATCATATCATTTCAAAATAAGAATATTTTTATATTATTGTTGGGGGCCAAACATGTTTCGTATGACGACAAAATTGTACATAAAAAAAATATTTTGTTTTTAATGAAATACGACCAAAAGAATAGTGCAGATAGGATTATAATTGTGGTATAAATTAATTAGAAAATAACAGAAGACTGTTATCGGTCCTTTGTTGACAGCTGAAGGGGGTGAACTTACTCGACAACCTCCACGTACTTTTTTAACTATCAAGCATGGGACTGCTAACAGCCAATTTGAATAGATTCGCATATTTCTTGTGAATGCTGCATTTCACAGGATGGATAATAAAACGGAAAAAGAAAAAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13593	SBF_like	SBF-like CPA transporter family (DUF4137)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038770	Homologous_superfamily	Sodium/solute symporter superfamily	Interproscan
IPR016833	Family	Putative sodium bile acid cotransporter	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18640	SOLUTE CARRIER FAMILY 10 MEMBER 7	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0009941	Cellular Component	chloroplast envelope	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14347	SLC10A7, P7; solute carrier family 10 (sodium/bile acid cotransporter), member 7	-	Exosome	ko04147	deepkoala