Gene detail

Detailed information of gfas1.m1.12648.m1 in Galaxea fascicularis

Genomic Location: Sc0002398:379...12392
NR annotation: CAH3022007.1, unnamed protein product, partial [Porites evermanni]

Gene Structure

More details in Jbrowse

Sequence

CDS

gfas1.m1.12648.m1

TTTGTATCATCAACAACACGTTTTCAATCAACAGACAGACCTTCCATAACAGCTCATTTGACCTCAGCAGCAAAGTCTTGGATTGGACAAACAGTTCGATTAACGTGTGAAGCAGATGGTCGCCCCATGCCAACCATTACTTGGAAAAAACAGGATGGGAGTAAAGTGAAGGAAGTTACAGCTACGCGGAAAATAGCGAGTGTAGAGATGAAAACTGGCGCAGAATTTGGAACTTACACATGTGAGGCTAAAAATACCGTTGGTGCTGCCGCTGCACGTACGGTGGACATCAAACAAATAAAGGCACCAGGCCCACCAAACATCGGTTCAGATGGCAGAGATATTCAAGCCCAATCACTGATGGTAAAATGGACTGCGCCATCTGATGATGGGAGCAGTCCAATCACTGCATACAGAGTAGTGATACTGAAGAGTGGCCAGGTGATAAGAAATGAGAACATAACCGACATAAACGCTCCGAAACAGATTTCTTTTGGGGGTCTGAGCATAAGCACCAACTATACTGTGAGGGTGTACGCTAGAAATGCTGTGTTTGAAGGAAATGCTGGTGAAGAGCTGATCAGGACAAAGTTTCAAGGAGTCCCAGCTGCACCCAAAATTTTACGCTTGTCTGAAGAAACCAACAATACCCAGATAACTCTAAAATGGAGTGAACCAGCGGACAACGGAAAACCAATCAAACGTTTCACTGTATACCAGAGAACAGTGAAGGAGGACGGTACACCACGAGAATGGAACCTGACCAGCGTGATAACAGAAATTTCCAACCGTCAAGTTAATGTTACATTGGATAAAGGAAAGGTGTACGAATTTGTAGTGACGGCTACAAACGAGTTTGGAGAGAGTTTGAAAGAAGAGGAGAAAATAAAAAAAATCCCAGTAGGGGGAGGAGTCCCAGCTGCACCCGAAATTTTACGCTTGCCTGAAGAAACCAACAATACCCAGATAACTCTAAAATGGAATGAACCAGTGGACAACGGAAAACCAATCAAGAATTATACAGTATACCAGAGAACAATGAAGGAGGACGGTACACCAGGAGAATGGAACCTGACCAGCGTGATAACAGACCTTTCCAACCGTCAATTTAATGTTACATTGGAGAAAGGAAAGGTGTACGAATTTGTAGTGACGGCTACAAACGAGTTTGGCGAGAGTTTGAAAGAAGAGGAAAAAATTAAAAAAATCACAGTAGGGGGAGGTGTTCCGTCAGCTGTAAAACTCAAAGCCGAGCAAAATGATGACAAGATTACCTTGACATGGGAAAAACCAGACGGTAATGGAGCAGCCATCACGAAGTATTCCGTCTACCATCGGGTTGCAAATGCCAAAGAGTGGGAAGACCCCATTGAGATAACTGCTGGGTCCAAACTTGAATACGTGTTTGAAGGCGAGAAAGGCAAAGAGTACGAATTTGTGGTGACGGCGTCAAACCGATATGGGACCACCAAGCCACTAGAAACTCAAGCAGGTTCTCCCTGTGGCAGTCTTCACGCTGCTTACGTCACTGTCATCGTTGTGTTGGTGATAATTATTGTTCTTCTAAGTGTCATGGTCTGGCGTTTGCGCCGTCGTCTAGGTGATAAATGTCGAAGATGCGAGAATCTTATAGCTATGGAGCCATTAGCTAATCAGACAACAGACAACACAAAACTCTCAACTGTGGCGCAGGCGAATGATACGCAGACTTACGCAACACCTATAGGTGGAGACTACATGCCCCTCCACGCCTCCACACGAAGTTGGGAAATCATGCGGGAACAAGTCGATATCATAAAAGTTATCGGTCAAGGAGCCTTTTCTCAAGTTGTCAAAGCAACAGTGAAGAACGTGCGTGGTTACCAGGAGTATATCACAGTGGCAGTGAAAATGCTAAAAGGCGAGAGTACACCACCGGGACCACCCGCGGGTCGAATAGATACCGCTGTTATCGCGGGCGCAGGAGCGGCAGGTGCCCTTTTGATTCTTGGCCTGATCTTGTTTGTAGTTTGGTGGAAACGTCGGAAAACCTCATCAGATCGTAAGTCGATAGTGTGCTCATTTTGTGTTTATGAGAGTGTTATTAGGTCAATATAG

Transcript

gfas1.m1.12648.m1

Protein

Uniprot

Uniprot term	Description
Q8WZ42	Titin OS=Homo sapiens OX=9606 GN=TTN PE=1 SV=4
A2ASS6	Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00041	fn3	Fibronectin type III domain	Domain	Interproscan
PF13927	Ig_3	Immunoglobulin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003961	Domain	Fibronectin type III	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR050964	Family	Striated Muscle Structural and Regulatory Protein	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13817	TITIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06729	PTGFRN, CD315; prostaglandin F2 receptor negative regulator	-	CD molecules	ko04090	deepkoala