Detailed information of gfas1.m1.13191.m1 in Galaxea fascicularis

Genomic Location: xfSc0000000:446226...456506
NR annotation: CAH3029427.1, unnamed protein product [Porites evermanni]
Species Galaxea fascicularis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
F7DRV9Bromodomain testis-specific protein OS=Xenopus tropicalis OX=8364 GN=brdt PE=3 SV=1
Q64127Transcription intermediary factor 1-alpha OS=Mus musculus OX=10090 GN=Trim24 PE=1 SV=1
Q58F21Bromodomain testis-specific protein OS=Homo sapiens OX=9606 GN=BRDT PE=1 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007915 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00439
all species →		BromodomainBromodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036427
all species →		Homologous_superfamilyBromodomain-like superfamilyInterproscan
IPR001487
all species →		DomainBromodomainInterproscan
IPR018359
all species →		Conserved_siteBromodomain, conserved siteInterproscan
IPR050935
all species →		FamilyBromodomain-containing chromatin readerInterproscan
IPR000315
all species →		DomainB-box-type zinc fingerInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22880
all species →		FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINSInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0000785
all species →		Cellular ComponentchromatinInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006338
all species →		Biological Processchromatin remodelingInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0070577
all species →		Molecular Functionlysine-acetylated histone bindingInterproscan
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gfas1.m1.13191.m1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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