Detailed information of gfas1.m1.13486.m1 in Galaxea fascicularis

Genomic Location: xfSc0000011:221731...221979
NR annotation: RMX60450.1, hypothetical protein pdam_00020207 [Pocillopora damicornis]
Species Galaxea fascicularis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A8PU71Succinate dehydrogenase assembly factor 1, mitochondrial OS=Bos taurus OX=9913 GN=SDHAF1 PE=3 SV=1
B0K036Succinate dehydrogenase assembly factor 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sdhaf1 PE=3 SV=1
Q3U276Succinate dehydrogenase assembly factor 1, mitochondrial OS=Mus musculus OX=10090 GN=Sdhaf1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0021739 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05347
all species →		Complex1_LYRComplex 1 protein (LYR family)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008011
all species →		DomainComplex 1 LYR protein domainInterproscan
IPR045295
all species →		DomainSDHAF1, LYR domainInterproscan
IPR052687
all species →		FamilySuccinate Dehydrogenase Assembly Factor 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47046
all species →		SUCCINATE DEHYDROGENASE ASSEMBLY FACTOR 1, MITOCHONDRIALInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0034553
all species →		Biological Processmitochondrial respiratory chain complex II assemblyInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K18167SDHAF1; succinate dehydrogenase assembly factor 1-Mitochondrial biogenesisko03029deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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