Gene detail

Detailed information of gfas1.m1.13984.m1 in Galaxea fascicularis

Genomic Location: xfSc0000034:514...15429
NR annotation: CAH3128583.1, unnamed protein product [Porites lobata]
Species Galaxea fascicularis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

gfas1.m1.13984.m1

ATGGCAGCTCATTACTCGATGGGTGATGATGAACCGAGCGAGAAAGTTCAGCTTATGAACGAGGACCAAACGAAGAAAACGTCGTCGAGTCCTGCTCGTCTCAACCGAAAAAGTTTGGTGATTTTCTTTGGAGTCACTGTACTGGCAGCAGCTATTGTGATTTGCACAGTAATGGCGACTCTGTATTCTGATGGACCATTTTCCAGAAGATTAGCACGGAATTCACGTAGATTTACATTTGATGACATTTTTAATGGTAGATTTTTTCCTCAAGGGTACACCTGCACATGGGTGTCAGATAGTGAATATATAACTCCTAAAAAGGAAGGCTTGGTGCTGATAAATTTAACCAAGAATGAATCTTCTGTGTTACTATATGCTGCAGAAGAGGGAAGTTTGGAGATGGAAACGCACTGGTTTTCACCAGACAGGAAGTATATTCTCTACACGAAAAACCAAAAACCGCAATATAGATATTCGTTCTGGGCAGAATATTACATATATGACATACAAAGGATGTCTTCAACGCAACTGAAACCAGAATTACAGGGAGAAGATCCCAGTAAAATACAATATGCCACATGGGGACAGGGATCGAGGAATAATTTGGTGTTTGTTTACAGAAATGATATATTTTACCTGGATTCACCAAGTGAGTCTAGCGGATCTGCTGTGCGGTTGACTGATAGTGGTGTGGAACACAAGATCTTTAATGGTGTCCCTGACTGGGTGTATCAAGAGGAGGTGTTGAACTCAAACCACGCCCTTTGGTTCTCGCCCGACAGCAGATTCTTGGCGTATATTCAATTTAATGACTCTTCAGTCACCTGGTATCAGTTTCCTTGGTATGGTGACAGGAAGAATGCCTACACTTCTATTCGTAAGATTGCCTATCCCAAACCAGGATACCCAAATCCAACAGTCAAGGTGTTTGTTGTGGATCTTCAGGCTCAGAATCTGAGGATTGAACTGCCAGAACCGTCTGCTTTCAAGAACATTGATCACTATGCAGTGAATGTTGGCTGGATATCAAACAAAGCTGTTTCAGTGACATGGCTGAACAGGGATCATAATGAAGCTATTTTTCATGTATGCACGCATAACTATGCTGGTGGATCTCATTTCCTTTGCAAGGAGAATTCTCAGCTGAAGGTTTATGGAGGATGGGTTGATGATAGGTACAACACTCCAATGGCATCCCTTGATGGGTCTTATTACATTACACTCTGGCCATTTCCACAATCCAGTTATGGAAACTTTATTCATATAGCAAAGCTGAAGACTCATCCCCAGGGTGAGCAAACTCCAGAAGCAATAACAAAGGGTCGCTGGGAAGTGCTTAGTATTCTTGCTCATGATGATATCAATGAAGTGGTGTACTTTAAGGGAACCAGGGAGTCACCTACCCAGTCCCATATTTACAGTGTTCAAATAAAAACTAAAGAAGTCTCCTGTTTGACTTGCGATATATCAACATTAATCCCTGGAAACAAGTGCACTTATTATGATGCAAGCTTCAGTAAGAAGGGGAGCTGGTACTTATTATCTTGTAAAGGACCAAAATACCCTGAAATAACAATGCGTAGTACAACAAAACACAAAGTAATTCCAATTGAAGACAACAAGGCTTTGAGAGAAAGACTCGATGAAGTGGTTCTTCCAAAAATAAAAAATTACCAAGTTAAAGTTGGAGCTTACGATATCTATGTGAAGGAGTACCGCCCTCCCAACTTTGATGAAGGAAAAAGATATGGCTTCTTGTTTTCAGTGTATGGTGGACCAAACTCACAAAAGGTCACTGATACATATGGATTCAGTTTTGATAGTGGTTATCTTGTCAGCAACTTTGACTTGATTGTGGTGAATCTTGATGCCAGAGGGTCCTGTTGTCGAGGGGAGAGATTCAAGCATGCAGTTTATAAACAACTTGGAAAGGCTGAAGCAGAGGATACCATAGCTGTTGCTAGGTACATTGCTGACAAGCCGTATGTGGATAAGAGCAAAATTGCTATCTGGGGATGGTCATATGGAGGTTTCATGGCATCTTATGTGCTTGGTCAGAATTCTGGTGTGTTTTCGGTTGGGATGGCTGTGGCACCTGTAACAGACTGGAGATATTAT

Transcript

gfas1.m1.13984.m1

ATAACCACTGATCAAACACATCAAAACAGTGTGATCCGCGCGAGTCTGTTGCATGATCGAGGATGAATGCGACGAAGAGTTTATCTATATTGTCTATTTTGCTTTCGTAAATGAGACCAAAATATCCCTAACAGATAGGAAATCTCCTTTAAGATAAAGAAATGGCAGCTCATTACTCGATGGGTGATGATGAACCGAGCGAGAAAGTTCAGCTTATGAACGAGGACCAAACGAAGAAAACGTCGTCGAGTCCTGCTCGTCTCAACCGAAAAAGTTTGGTGATTTTCTTTGGAGTCACTGTACTGGCAGCAGCTATTGTGATTTGCACAGTAATGGCGACTCTGTATTCTGATGGACCATTTTCCAGAAGATTAGCACGGAATTCACGTAGATTTACATTTGATGACATTTTTAATGGTAGATTTTTTCCTCAAGGGTACACCTGCACATGGGTGTCAGATAGTGAATATATAACTCCTAAAAAGGAAGGCTTGGTGCTGATAAATTTAACCAAGAATGAATCTTCTGTGTTACTATATGCTGCAGAAGAGGGAAGTTTGGAGATGGAAACGCACTGGTTTTCACCAGACAGGAAGTATATTCTCTACACGAAAAACCAAAAACCGCAATATAGATATTCGTTCTGGGCAGAATATTACATATATGACATACAAAGGATGTCTTCAACGCAACTGAAACCAGAATTACAGGGAGAAGATCCCAGTAAAATACAATATGCCACATGGGGACAGGGATCGAGGAATAATTTGGTGTTTGTTTACAGAAATGATATATTTTACCTGGATTCACCAAGTGAGTCTAGCGGATCTGCTGTGCGGTTGACTGATAGTGGTGTGGAACACAAGATCTTTAATGGTGTCCCTGACTGGGTGTATCAAGAGGAGGTGTTGAACTCAAACCACGCCCTTTGGTTCTCGCCCGACAGCAGATTCTTGGCGTATATTCAATTTAATGACTCTTCAGTCACCTGGTATCAGTTTCCTTGGTATGGTGACAGGAAGAATGCCTACACTTCTATTCGTAAGATTGCCTATCCCAAACCAGGATACCCAAATCCAACAGTCAAGGTGTTTGTTGTGGATCTTCAGGCTCAGAATCTGAGGATTGAACTGCCAGAACCGTCTGCTTTCAAGAACATTGATCACTATGCAGTGAATGTTGGCTGGATATCAAACAAAGCTGTTTCAGTGACATGGCTGAACAGGGATCATAATGAAGCTATTTTTCATGTATGCACGCATAACTATGCTGGTGGATCTCATTTCCTTTGCAAGGAGAATTCTCAGCTGAAGGTTTATGGAGGATGGGTTGATGATAGGTACAACACTCCAATGGCATCCCTTGATGGGTCTTATTACATTACACTCTGGCCATTTCCACAATCCAGTTATGGAAACTTTATTCATATAGCAAAGCTGAAGACTCATCCCCAGGGTGAGCAAACTCCAGAAGCAATAACAAAGGGTCGCTGGGAAGTGCTTAGTATTCTTGCTCATGATGATATCAATGAAGTGGTGTACTTTAAGGGAACCAGGGAGTCACCTACCCAGTCCCATATTTACAGTGTTCAAATAAAAACTAAAGAAGTCTCCTGTTTGACTTGCGATATATCAACATTAATCCCTGGAAACAAGTGCACTTATTATGATGCAAGCTTCAGTAAGAAGGGGAGCTGGTACTTATTATCTTGTAAAGGACCAAAATACCCTGAAATAACAATGCGTAGTACAACAAAACACAAAGTAATTCCAATTGAAGACAACAAGGCTTTGAGAGAAAGACTCGATGAAGTGGTTCTTCCAAAAATAAAAAATTACCAAGTTAAAGTTGGAGCTTACGATATCTATGTGAAGGAGTACCGCCCTCCCAACTTTGATGAAGGAAAAAGATATGGCTTCTTGTTTTCAGTGTATGGTGGACCAAACTCACAAAAGGTCACTGATACATATGGATTCAGTTTTGATAGTGGTTATCTTGTCAGCAACTTTGACTTGATTGTGGTGAATCTTGATGCCAGAGGGTCCTGTTGTCGAGGGGAGAGATTCAAGCATGCAGTTTATAAACAACTTGGAAAGGCTGAAGCAGAGGATACCATAGCTGTTGCTAGGTACATTGCTGACAAGCCGTATGTGGATAAGAGCAAAATTGCTATCTGGGGATGGTCATATGGAGGTTTCATGGCATCTTATGTGCTTGGTCAGAATTCTGGTGTGTTTTCGGTTGGGATGGCTGTGGCACCTGTAACAGACTGGAGATATTAT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P22411	Dipeptidyl peptidase 4 OS=Sus scrofa OX=9823 GN=DPP4 PE=1 SV=3
P28843	Dipeptidyl peptidase 4 OS=Mus musculus OX=10090 GN=Dpp4 PE=1 SV=3
P14740	Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001275 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00930 all species →	DPPIV_N	Dipeptidyl peptidase IV (DPP IV) N-terminal region	Repeat	Interproscan
PF00326 all species →	Peptidase_S9	Prolyl oligopeptidase family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029058 all species →	Homologous_superfamily	Alpha/Beta hydrolase fold	Interproscan
IPR002469 all species →	Domain	Dipeptidylpeptidase IV, N-terminal domain	Interproscan
IPR001375 all species →	Domain	Peptidase S9, prolyl oligopeptidase, catalytic domain	Interproscan
IPR050278 all species →	Family	Serine Protease S9B/DPPIV Subfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11731 all species →	PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0008236 all species →	Molecular Function	serine-type peptidase activity	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0008239 all species →	Molecular Function	dipeptidyl-peptidase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23014	DPP10; inactive dipeptidyl peptidase 10	-	Transport	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.