Detailed information of gfas1.m1.14205.m1 in Galaxea fascicularis

Genomic Location: xfSc0000046:74799...88957
NR annotation: XP_029188022.2, LOW QUALITY PROTEIN: protein Jade-3-like [Acropora millepora]
Species Galaxea fascicularis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6IE81Protein Jade-1 OS=Homo sapiens OX=9606 GN=JADE1 PE=1 SV=1
Q6GQJ2Protein Jade-1 OS=Xenopus laevis OX=8355 GN=jade1 PE=2 SV=1
Q6ZPI0Protein Jade-1 OS=Mus musculus OX=10090 GN=Jade1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004052 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13832
all species →
zf-HC5HC2H_2PHD-zinc-finger like domainDomainInterproscan
PF13831
all species →
PHD_2PHD-fingerFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019786
all species →
Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR034732
all species →
DomainExtended PHD (ePHD) domainInterproscan
IPR011011
all species →
Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR019787
all species →
DomainZinc finger, PHD-fingerInterproscan
IPR013083
all species →
Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR050701
all species →
FamilyHistone Modification RegulatorInterproscan
IPR001965
all species →
DomainZinc finger, PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13793
all species →
PHD FINGER PROTEINSInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006357
all species →
Biological Processregulation of transcription by RNA polymerase IIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gfas1.m1.14205.m1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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