Gene detail

Detailed information of gfas1.m1.143.m1 in Galaxea fascicularis

Genomic Location: Sc0000002:80045...96966
NR annotation: XP_029203357.2, GMP synthase [glutamine-hydrolyzing]-like [Acropora millepora]
Species Galaxea fascicularis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

gfas1.m1.143.m1

ATGCGCAGACCTCGCGCAAACCGCGGGAAGGTGAAGTGGAAGATGGCGGCGAACCTGAGCAAAGTTGCTGGAATGGGTTCGTGTATCAACGGTCACGTAATGCAAAACGACAGCGCAATGTCGGAACCACTACCAAGTCAAGAAAAGGTGGCAATTCTAGATGCTGGAGCGCAGTACGGCAAGGTGATTGATCGCAGAGTGCGTGAACTCTGTGTGGAAACTGAGATTCTTCCTCTGGATTCATCTATATACACTATACAGGAGAAAGGGTTTAGAGCCATTATTATATCTGGAGGACCTAACAGTGTTTATGCTGAAGATGCTCCTAAATACGATCCTGCTATTTTTACTATTGGACTTCCAGTTCTAGGAATATGCTATGGAATGCAGATGCTCAACAAAGAATTTGGAGGAACTGTGACAAAGAAAGACATCAGGGAAGATGGACAGTTCAAGATCACTCTGGAGACATCATCACCACTTTTTAGAGGATTGCAGTCTGAGGAAGAGGTATTGCTGACACATGGCGACTCAATTGACCGAGTGGCAAGCAATTTGAAAGTCATTGCAAAGTCTGGGGATCTTGTTGCAGGTATTGAGGATGAATCACGCAAATTGTATGGAGTACAGTTTCACCCAGAAGTTGATCTCACAGAGAATGGCATAACAATGATTAAGAATTTTCTTTATGGGGTGGCAGGCTGTTGTGGAACATACACTGTTGATTGCAGAATGGAAACTTGCATCAGGCAAATTCAAAAGACTGTTGGCAATATGAAAGTTTTGGCTCTTTCTCATGATCAAGTTGTAGCTGTGCACATTGACAATGGATTTATGCGGAAGAATGAAAGCCAGCAAGTGGAGGAATCACTGAAACGACTTGGAGTTAGATTAAAAGTTGTCAATGCTGCTCATCAGTTTTATAACAGTTCAACCGTAATATCTGGCAGAAAAGACCAGCCAGCTGTCAAGAAACAAATCACAAAGACGTTGAATGTAACAACCAATCCAGAGGAGAAGAGAAAGATTATTGGAGACACATTCATTAAGGTCAGAGTGGCATTTTCTTGGCTTATACCGATTGCAAATGAAGTTGTAGCTGAGCTCGACCTTACAGAGCATAACACCTTCCTTGCACAAGGTACCCTTCGACCTGATCTCATTGAAAGCGCTTCATCGCTAGCAAGCAACAAAGCTGAAGCTATAAAGACGCACCATAACGACACAGCATTAGTGAGAAACTTAAGAGCAAAGGGACGAGTTATTGAACCTCTAGCAGATTTTCACAAAGATGAAGTCAGAGCTCTCGGTAGAGACCTCGGATTACCACCAGACATTGTTCAGAGACATCCCTTCCCCGGTCCTGGGCTCGCCATTCGTATCATTTGCGGCGACGAACCTTACCAAGGAAGCGATTTTGCTGAAACAAATATTATCCTTGGACAAATTGTAGATTTTGTTACCGCTATTAAAAAGCCCCATTCGCTTTTCAGCCGAGTGAAACTCAGTACATCAGAAGAAGACAGAGGTATTCTCCTGCAGATCACATCAAAATACAAAATTGGTGCCACTCTGCTGCCAATCAAATCAGTGGGTGTCCAGGGAGACGGACGGACGTACAGCTATGTTGTAGCGTTATCAAGCAATGATTCACCCGACTGGACGTCCCTTATGTTCCTCGCAAAACTAATCCCTAAAGTCTGCCATAATATCAACAGAGTTTGCTACACGTTCGGTAAAAGGATCAGGTTTCAGATTCAGGACATTACATCAACATTTTTGTCAGCAGGAGTGATAAGTACTTCAAGACAAGCAGATCACGTGGCACATTCTGTTTTGCGGAACCACGGGTTGTTGTCGCAGATTAGTCAGATGCCTATTGTTCTTATACCCGTTCACTTCGACCGTGATCCAATTGACCACATCCCATCTTGTCAGCGGTCAGTGGTGATCAGAACGTTTATAACAAACGACTTCATGACTGGGGTCCCTGCTACACCAGGAAAGCAAATTCCTGAAGAGGTTTTGGATGAAATGGTCAAAAATTTGCAAAAAGTTCAAGGCATCTCACGAGTTCTGTATGATCTGACTGCCAAGCCCCCAGGCACTACTGAATGGGAATAA

Transcript

gfas1.m1.143.m1

CGAACTATGCGCAGACCTCGCGCAAACCGCGGGAAGGTGAAGTGGAAGATGGCGGCGAACCTGAGCAAAGTTGCTGGAATGGGTTCGTGTATCAACGGTCACGTAATGCAAAACGACAGCGCAATGTCGGAACCACTACCAAGTCAAGAAAAGGTGGCAATTCTAGATGCTGGAGCGCAGTACGGCAAGGTGATTGATCGCAGAGTGCGTGAACTCTGTGTGGAAACTGAGATTCTTCCTCTGGATTCATCTATATACACTATACAGGAGAAAGGGTTTAGAGCCATTATTATATCTGGAGGACCTAACAGTGTTTATGCTGAAGATGCTCCTAAATACGATCCTGCTATTTTTACTATTGGACTTCCAGTTCTAGGAATATGCTATGGAATGCAGATGCTCAACAAAGAATTTGGAGGAACTGTGACAAAGAAAGACATCAGGGAAGATGGACAGTTCAAGATCACTCTGGAGACATCATCACCACTTTTTAGAGGATTGCAGTCTGAGGAAGAGGTATTGCTGACACATGGCGACTCAATTGACCGAGTGGCAAGCAATTTGAAAGTCATTGCAAAGTCTGGGGATCTTGTTGCAGGTATTGAGGATGAATCACGCAAATTGTATGGAGTACAGTTTCACCCAGAAGTTGATCTCACAGAGAATGGCATAACAATGATTAAGAATTTTCTTTATGGGGTGGCAGGCTGTTGTGGAACATACACTGTTGATTGCAGAATGGAAACTTGCATCAGGCAAATTCAAAAGACTGTTGGCAATATGAAAGTTTTGGCTCTTTCTCATGATCAAGTTGTAGCTGTGCACATTGACAATGGATTTATGCGGAAGAATGAAAGCCAGCAAGTGGAGGAATCACTGAAACGACTTGGAGTTAGATTAAAAGTTGTCAATGCTGCTCATCAGTTTTATAACAGTTCAACCGTAATATCTGGCAGAAAAGACCAGCCAGCTGTCAAGAAACAAATCACAAAGACGTTGAATGTAACAACCAATCCAGAGGAGAAGAGAAAGATTATTGGAGACACATTCATTAAGGTCAGAGTGGCATTTTCTTGGCTTATACCGATTGCAAATGAAGTTGTAGCTGAGCTCGACCTTACAGAGCATAACACCTTCCTTGCACAAGGTACCCTTCGACCTGATCTCATTGAAAGCGCTTCATCGCTAGCAAGCAACAAAGCTGAAGCTATAAAGACGCACCATAACGACACAGCATTAGTGAGAAACTTAAGAGCAAAGGGACGAGTTATTGAACCTCTAGCAGATTTTCACAAAGATGAAGTCAGAGCTCTCGGTAGAGACCTCGGATTACCACCAGACATTGTTCAGAGACATCCCTTCCCCGGTCCTGGGCTCGCCATTCGTATCATTTGCGGCGACGAACCTTACCAAGGAAGCGATTTTGCTGAAACAAATATTATCCTTGGACAAATTGTAGATTTTGTTACCGCTATTAAAAAGCCCCATTCGCTTTTCAGCCGAGTGAAACTCAGTACATCAGAAGAAGACAGAGGTATTCTCCTGCAGATCACATCAAAATACAAAATTGGTGCCACTCTGCTGCCAATCAAATCAGTGGGTGTCCAGGGAGACGGACGGACGTACAGCTATGTTGTAGCGTTATCAAGCAATGATTCACCCGACTGGACGTCCCTTATGTTCCTCGCAAAACTAATCCCTAAAGTCTGCCATAATATCAACAGAGTTTGCTACACGTTCGGTAAAAGGATCAGGTTTCAGATTCAGGACATTACATCAACATTTTTGTCAGCAGGAGTGATAAGTACTTCAAGACAAGCAGATCACGTGGCACATTCTGTTTTGCGGAACCACGGGTTGTTGTCGCAGATTAGTCAGATGCCTATTGTTCTTATACCCGTTCACTTCGACCGTGATCCAATTGACCACATCCCATCTTGTCAGCGGTCAGTGGTGATCAGAACGTTTATAACAAACGACTTCATGACTGGGGTCCCTGCTACACCAGGAAAGCAAATTCCTGAAGAGGTTTTGGATGAAATGGTCAAAAATTTGCAAAAAGTTCAAGGCATCTCACGAGTTCTGTATGATCTGACTGCCAAGCCCCCAGGCACTACTGAATGGGAATAAACAGTCAGACGAGATAACGGCAGCAATAAGCAGGCGGCTAGCGAGTCACCGGATAATGTGACCTTTATTATTTCACTGGGTTACTAGAGCATGATGTCAAAACTAGTCCTAGATTTTAAACGACGACGAGAGTAAACCTCACTTTCTTCTAGATGAATTAACCGGTTCTAAAAACAAACGAGTTATTGACGACATCAAGAAGACAACAGTCCTTCATTGGACGACACTTGCCCGGACAATTGTCCCTCACTGACTTATGAGATACGTCTTGCTTCAAACCGTTTACAACAGAATTTGATTGACTCGTCCCGTCTTGTGTTCGCTTTAATTGGCTGGCTAGGTTTTCTCGGATTCTGGTGTCAAAGCAGTCATCAGAACACAGCTCATTTTCCTAGTGTCATTTGAGTACAACGACTAGAATTTCAAGTGAAATTCTATTGAGTTGCAAGTAACAACAGCTTAATTTGCATGAGAAAACAAAGAACCGAAGGATTGTCGGAGCTCTACACAAGTGACGCTTTCGTGAAAACGCCCATTCACGTCTGCGTCCAAAAGATACCAGAGAGACGTACATCGAAAACTAGCATATTTAATGGCGCAAGATCTACGTAACTATTATTTAATTCACATTAACTTCAAAGCTTTCTTTTGAACTGGTGTTTATTTGTGTTGCATTGAGGTAGTAAAGAATGTCTGCGGGATCAACACTGTGGTCAGTATTGACTGTGCTTCAATGTATTCACAATACGGAATTTCTCTTTTATTTGTCTTATTTATTACTTTTAAGCAAAACAAAAATTGGTGACATTACAGTTCTGTCTAGTGATTTTCTTGTTCAAGGAAATAGATAAGGGCAAAATTCGTTCGAATATAAAATACCATGTCAATTCTGGGTTAGATTTTATTCCAAACAATATATCTTTGACTTTGTTAAACTTGCGCTGACTAGCAGAAAGTAGGTAAATAGCTTCTGTATATAGTATTTTGAGAAGGAACAATTAAAGTGCGTTTATGTTGTATATGGTTTTGTGGAATAACCTTGATCTACAGAAAATTAAGCTGAAACGTGTTGAAATGTGTACAGTTGAATCTTTGATTTGAGGAATTGCA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P49915	GMP synthase [glutamine-hydrolyzing] OS=Homo sapiens OX=9606 GN=GMPS PE=1 SV=1
Q3THK7	GMP synthase [glutamine-hydrolyzing] OS=Mus musculus OX=10090 GN=Gmps PE=1 SV=2
Q4V7C6	GMP synthase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Gmps PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003265 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00117 all species →	GATase	Glutamine amidotransferase class-I	Domain	Interproscan
PF00958 all species →	GMP_synt_C	GMP synthase C terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029062 all species →	Homologous_superfamily	Class I glutamine amidotransferase-like	Interproscan
IPR014729 all species →	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan
IPR004739 all species →	Domain	GMP synthase, glutamine amidotransferase	Interproscan
IPR017926 all species →	Domain	Glutamine amidotransferase	Interproscan
IPR025777 all species →	Domain	GMP synthetase ATP pyrophosphatase domain	Interproscan
IPR001674 all species →	Domain	GMP synthase, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11922 all species →	GMP SYNTHASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003922 all species →	Molecular Function	GMP synthase (glutamine-hydrolyzing) activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006177 all species →	Biological Process	GMP biosynthetic process	Interproscan
GO:0003921 all species →	Molecular Function	GMP synthase activity	Interproscan
GO:0006164 all species →	Biological Process	purine nucleotide biosynthetic process	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for gfas1.m1.143.m1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.