Detailed information of gfas1.m1.14575.m1 in Galaxea fascicularis

Genomic Location: xfSc0000074:161009...169677
NR annotation: XP_015780153.1, PREDICTED: sonic hedgehog protein-like [Acropora digitifera]
Species Galaxea fascicularis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q91612Indian hedgehog protein OS=Xenopus laevis OX=8355 GN=ihh PE=2 SV=1
Q90385Sonic hedgehog protein OS=Cynops pyrrhogaster OX=8330 GN=SHH PE=2 SV=1
Q62226Sonic hedgehog protein OS=Mus musculus OX=10090 GN=Shh PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001930 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01085
all species →		HH_signalHedgehog amino-terminal signalling domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009045
all species →		Homologous_superfamilyHedgehog signalling/DD-peptidase zinc-binding domain superfamilyInterproscan
IPR050387
all species →		FamilyHedgehog SignalingInterproscan
IPR000320
all species →		DomainHedgehog, N-terminal signalling domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11889
all species →		HEDGEHOGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0001708
all species →		Biological Processcell fate specificationInterproscan
GO:0005113
all species →		Molecular Functionpatched bindingInterproscan
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan
GO:0005615
all species →		Cellular Componentextracellular spaceInterproscan
GO:0007224
all species →		Biological Processsmoothened signaling pathwayInterproscan
GO:0010468
all species →		Biological Processregulation of gene expressionInterproscan
GO:0007267
all species →		Biological Processcell-cell signalingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gfas1.m1.14575.m1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP