Gene detail

Detailed information of gfas1.m1.15649.m1 in Galaxea fascicularis

Genomic Location: xfSc0000177:4797...17861
NR annotation: XP_029195974.1, heat shock factor protein isoform X1 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

gfas1.m1.15649.m1

CCGTAGACCGGCAGGCGCGCAAAGCGTATATATAAGCTGCGCGGGGGATGCTCAAAAAACATGGCTGATATGTGACTTGCTTGAGTAACTTATGCACTTTGTTTCACACACGCAAACTTTGCGAGAACGATTTATTGTCTAGGGTGGTCTACAAAAAGTATGCCGATGAGGACAGGAGACGCAGATTCGAGTAATATCCACTCTAACGTGCCTGCTTTTCTGGTAAAACTTTGGAAGCTGGTTGAAGATCCGCAGTATGATGGGCATATCTCGTGGAACAAGAATGGAACTGGATTCCTTGTTCACGATCAAGCTACTTTCGCACGTGAAATTCTTCCCAAGTATTTCAAACACAACAATTTTGCGAGCTTCGTTCGTCAGCTGAATATGTATGGCTTCCGCAAAGTGATTGGTGCTGAACAAGGAGGCCTGAGATCTGAGAAAGATGAGTGGGAATTTTTCAATGGAAACTTCAACAGATTTCACCCTGAATTACTTGAAAACGTGAAGAGGAAGGCTACACCAGAAGAAAAGAAATTTAAGACTGAAGATGTATCCAAAGTGCTGAATGACGTCCAGGATATGAAGGGAAAACAGGATGAAATGACCATGAAACTTGATCAGATAAAAAGATTAATGCTCCAGGACAGTACGGAGGAACCATCGTCCAAAAGAGAGCGCTATGAATACAGAGATGGGTCTGGTCCGAGCAGTGGGCAACCCCCACCAAGCTATTCTACTCCAAGGCCCAGCACACAGACTCTCACAATTTCTGACATATCGAATGTTCCTTCGACAAGTCTTCCTTCCACAAGTGGACCCCTTATAACTGCATTGGATGATGACTCCATATCACATGCCAGACCTGTCATTAGATTCCCAGAGGATTCAGGTCCTTCATCATCACAACCTGTTGTATCCAGTCCAGTTTCCACATCAACAGCACCAACTTACCCACAAGCCTCAGTTGTACAGCCGTGTGTATCAACAGGCGTAGTTACTTTTCCTGAGGAGCAGAACCCAACCCCTGTTGTTCATCCAACACACATCATGGAGCCTCAATCGTACGATGAGCATCATACTATAAGAAATGCCCCTATGAGGCGGGGACTCTCTCAGGAAGAAGTGGCAGAGAGGAATTATATTGGTGACCAGGTGGACTACATTTCTCAGAACCTTGATAACATTCAGTATCAACTGGCAAATCACCCTTTAATGCTGGATAATAGTTTATTCTATGATGTCTTTGGCCAGGAAGGGGGTCATCCAAGCCAGGTTCATGATCCACTGGATCTTTTAGCAGATCGGGCTGCAGCTAGTCCCCTTCCTAGTGGAGTAGGGCATGGCCCATCACAAGGTCATGAACTTGTACAGTATGGTATGCAGGGGTCTGGTGCTAGCAGCAGCTCTCCCCGGGGGCAGCCTAGGTCCCGAGACCGTGAGGAACAATACGCACGAAGGGAGTGGGTCCAAGGCCAACAGCAGCAGCAGCAGCAGCAGCAACAGCAGGCGGATTATGATGTTGTGCACCATTTATTTAATGGCTGAGAAATTTTCTGTTAAATGTAGTACTTGACTTTCTTTGGTGAAGCATTCTAGTGGTTTTTAAGCATTTGTTCGAGTACTGTATATTTTTTAAGGCAATTAAGTTCATCACATGCCTGGTTCACTCGTGAAAACAAACGAGTAGAAGTATTCAGCCTTGTGCGGTTACTGCTGTTGCAAGAGTAGTGCAATATTTAAGCCACTTAAAGCTCACAACAACAGCACGTGACACGAGGGTCACGTGAGTGATGTTTGTCAGTTTGACCCACCACCTATGCGGCATTTCAGTTTCCTTAGAAATTGACGCCCAGTACCCCCTCTGCCGTCCCGTCATGGCTGGATTTCGTTTTACATTAGGTTGTATCTAGAGTTTTAAAAACTTTTAATTAGTCGCTTTGGGAGCGGAGCTGTGCCCCTGGCCTCTCGACTTGTGACAAGTATGCGTTCTATTGGTTATCACACTTAAACTTTTTAAAGCATGTATGATACGGTACAAAAATAAACATAGGTATCTGAAATCGAAACCAAATATATATCGTCATGGGCTAAATTGTTTGTGTATTCTCTGTAAAGGTACAAATGGCATTTGCTAACTAAGGGTCTTAAAAGTACAATAACCGAATAATGCTTCTAGTAATTTCAGAAATTTGACTTAAGATAAAGTTGCGTAGAACAATAAAGAAAGAAATAGAACTAACTGAAAACAA

Protein

Uniprot

Gene family

Uniprot term	Description
Q08DJ8	Heat shock factor protein 1 OS=Bos taurus OX=9913 GN=HSF1 PE=2 SV=1
P38529	Heat shock factor protein 1 OS=Gallus gallus OX=9031 GN=HSF1 PE=1 SV=1
Q00613	Heat shock factor protein 1 OS=Homo sapiens OX=9606 GN=HSF1 PE=1 SV=1

Gene family	Subfamily
Transcription Factors Family	HSF

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00447	HSF_DNA-bind	HSF-type DNA-binding	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000232	Domain	Heat shock factor (HSF)-type, DNA-binding	Interproscan
IPR027725	Family	Heat shock transcription factor family	Interproscan
IPR036390	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10015	HEAT SHOCK TRANSCRIPTION FACTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0043565	Molecular Function	sequence-specific DNA binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09419	HSFF; heat shock transcription factor, other eukaryote	-	Transcription factors	ko03000	deepkoala