Detailed information of gfas1.m1.1606.m1 in Galaxea fascicularis

Genomic Location: Sc0000048:168609...193712
NR annotation: XP_020628609.1, striatin-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
A5D7H2Striatin-3 OS=Bos taurus OX=9913 GN=STRN3 PE=2 SV=1
Q13033Striatin-3 OS=Homo sapiens OX=9606 GN=STRN3 PE=1 SV=3
P58405Striatin-3 OS=Rattus norvegicus OX=10116 GN=Strn3 PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08232StriatinStriatin familyFamilyInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013258DomainStriatin, N-terminalInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR051488FamilyWD repeat-containing striatinInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15653STRIATINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04249TSHR; thyrotropin receptor-G protein-coupled receptorsko04030deepkoala

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