Gene detail

Detailed information of gfas1.m1.17179.m1 in Galaxea fascicularis

Genomic Location: xfSc0000379:36744...48993
NR annotation: XP_029196859.2, transmembrane prolyl 4-hydroxylase-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

gfas1.m1.17179.m1

ATGAACGAGAAAGGAGACCGAACGCCAGTTGGCTCTTTAGTGGCCTGGTCATTAGCTTTTGGAGTGATGGCGTTAGCCATAATCACTGGCAACTCCTTAGCCATTGTCGTGCTTACGAGAAGGAAGCTACTACGCAAGCGCACAAGCTATTTTCTCCTCTCTTTAGCGGTAGCCGACATGACAGTTGGGGTATTTTCAGTCCCGACGTTTATCTACCAGCTAATTTGTTATTGGAAGAATGGATTTATTACTCCGTCGATAATTTTGAACATCGCAAAAGCACTTGATGTGTTTTGTGGTCTTGCGTCTACATTTACACTCACTGTAATAGCGTTGGAGAGACTGGGCGCCATCTGCTTTCCCTTGCGTCATCGCACGTCGCCACGAAAGCTGTACGATGCTTCGATTTCATTCGTGTGGATTCTTGCCGCTTTGTTAACAAGTCTGTATTTTTTCCACGAATATAGGCTGATCCAACACAAAGTATTTTTCTGGTTTTTGATCTTAACTTTTTTGGTGTCCATGTTGATCATGCTGTTAGCTTACTTCGCTATCTGGTTAAAGGCGCACGCATCTCAGGCTTATTACAGAGAAGCCAGCCTGGAATCATCGGACACAAGCTCTGAGAGGCATAGAACTTTCCGTGCAAGTCATTATGCCAAGGACCGAAACAGACGCGCTGCTGAAAATGACCGAAAACTTTCTGTGACTGTATTTATAGTGACAACAGTTTTTATTCTAACTTGGCTTCCATTTCACATTATTAATTTGATTGTTTTCTTGGAGTGCAAAGCTTTCCCTTGCTCTGCACAACCTTCCATCGACGTGATTTACTTCTGTAAATTGCTGCATTATACAAACTCTTTTCTTAATCCTGTCATATATTCGCTTAGTTTGAGGGATTTTCGAACTACACTTAAAAAGATTATTTCTAGTAAAGCAGGCGGCGCTAGCGCTTCTCATGACGAACAGGAGGATGTCGGGCCATGCATCATCAGGAGGACAAAGTTACCACGTCTAGAGCCTATCGAGGTTGGCCATGTTCGGCAGATGGAGTTAATCAAAAGCGAGAAGCCTTACACTGTTAAAACACTGAGCATTAAACCTCCTATATTCGAAATTCCTGACTTTTTAACTGAAGCGGAGACAGCGCGACTTCTTTACGTTGCTGAAAATGGCAAACTAGAGAGTAGTGAGGTTTATCATTTCTCCTTGGACGAGCTTCTGGGCCAAAACTCCTTCGAGCAGTGGGATCTTAATAGGGATGACTTCATTAACACAGACGAGATAATCTTTGGAGTGCGATACTTTCGAGATTTACATTTCACACCAAGTGATGTCAGGAACATGTTGAAATCTTTGAAAGCCGGAGAGTATGAGGCAGGTAGCATTCATCGAAGTGAATTTCAGCCTGACGAAATTATGAAATATGTAGAGAAAGTGGGGAATCTGGAGACCTCGGTCAAAGGTCGTCATAGCAACCAAACATTCATTGAACTGCATTCCGATGATGAATTTGCCCTAAAACTCGATTTAAAAAAAGCTGCGCTCACTGGACTTCCAATTGAAATAATACAAGGGAGTGAAACTCCGGTGGCAGTGCGGTATGGCCCTGGAGGACACTATCATGGTCATTATGATTCGCACCCAGTAGACGCAGGCGATTCTTGCTGTGATCGACGTTCATTGGATAACTGTCGTATCTGTAGGTATATCACAGTTTTGTACTTTCTCAATGCTGTGGAGGAAGGAGGACAGACAGCTTTTCCTGTCGCAGATAATGCATCATTCAGCTACGAGATGTGGGCACGAAAATCCAACTATCTTTCCAATTTGAGCGCCTACTGCACCAAGGCCAATCTCAAGGTTACACCGAAACGAGGCACGGCGATCATGTGGTATAATCACGTTATCGATGAATCAACTGGCTGGCTGTCAAGCCTCGACTCTATGTCATACCATGGAGGGTGTGACGTGGTAAAGGGCCACAAGTGGATTGTAAATAACTGGATAAATATCATTGGAAATAGCTGGGACGATTTACGGACTTGGAACAATAAACATTCTAGAATGATTGACCAGAAAGGCGATTAA

Transcript

gfas1.m1.17179.m1

Protein

Uniprot

Uniprot term	Description
Q9NXG6	Transmembrane prolyl 4-hydroxylase OS=Homo sapiens OX=9606 GN=P4HTM PE=1 SV=2
Q8BG58	Transmembrane prolyl 4-hydroxylase OS=Mus musculus OX=10090 GN=P4htm PE=1 SV=1
Q93127	Probable G-protein coupled receptor No18 OS=Amphibalanus amphitrite OX=1232801 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13640	2OG-FeII_Oxy_3	2OG-Fe(II) oxygenase superfamily	Domain	Interproscan
PF00001	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000276	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR044862	Domain	Prolyl 4-hydroxylase alpha subunit, Fe(2+) 2OG dioxygenase domain	Interproscan
IPR017452	Domain	GPCR, rhodopsin-like, 7TM	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR005123	Domain	Oxoglutarate/iron-dependent dioxygenase	Interproscan
IPR006620	Domain	Prolyl 4-hydroxylase, alpha subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24246	OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0005506	Molecular Function	iron ion binding	Interproscan
GO:0016705	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Interproscan
GO:0031418	Molecular Function	L-ascorbic acid binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06711	PH-4; hypoxia-inducible factor prolyl 4-hydroxylase	EC:1.14.11.-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala