Gene detail

Detailed information of gfas1.m1.1744.m1 in Galaxea fascicularis

Genomic Location: Sc0000055:183083...193067
NR annotation: XP_020625204.1, kinesin-like protein KIF18B isoform X1 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

gfas1.m1.1744.m1

GATGTGAAGCATGACGCTTTGAACAACACTTCGACCTGATAATCAGCTTGATCTGTCAACAAAATGGCTCAAAACTCAGCCAGAAGGTCCCGAATAAACGACAAAAATGGAGAAAAAGAAAAGAATAGTAACATGAAAGTTGTTGTCAGAGTGAGGCCGCCTAACAGCATGGAGATCAGCAAGCAATCTTCTACTTCAGTTCGCGTAATGGACGAACGCGTTCTTGTTTTCGATCCCAAGGACGATTCCATGGACTATCTACATGGCGATCGACGAAGAAAGCAACCTAAATTCTTGACACGGCGAGCAAGAGACTTGAAGTTCATGTTTGATCGTGTGTTCGATGACGGCGCAAGCAACAGGGATGTCTTCGAGCACACAACTAGCGCTATCATCGATGGCGTTCTTGGTGGCTACAACTGTACTGTGTTCGCCTACGGAGCTACGGGAGCAGGAAAAACTTTCACGATGTTAGGTGACTCGGCAAACGCTGGAGTTATGTTTCTAACCATGATGGAATTGTATAGCAGAATCAACGCTTGTAAAGACGAGAAAAGCTCCTACGTAGCGGTTTCCTACCTTGAGGTTTATAACGAGACAATCAGGGATCTTCTCATGCCAGGCCAGCCACTTGCAGTTCGAGAGGATCCACAAAGAGGGGTGTGTGTCAGTGGTCTGACCCTCCACAAGCCTATTTCAGCAGAAGAGCTACTAGGAATGTTAGAATTTGGTAATAACAATAGGACTCAGCACCCCACTGATGCGAATGCACAGTCCTCTAGATCTCATGCTGTGTTTCAGGTGTTTGTTCGACAAAAGGACAGGACAGCAGGGTTGAAAGCAAATTTTACCATGGGAAAAATGTCACTGATTGACTTAGCAGGATCTGAGCGAGCATTAGTCACATCTAATAGAGGGGCACGGTTCAGAGAGGGTGCCAATATTAACAAGTCCCTTTTGGCACTTGGAAACTGCATTAATGCTCTTGCAGACAAAGAGAACAAAGCAGGGCATATTCCGTACAGAGACAGCAAGTTAACAAGACTCCTTAAAGACTCTTTGGGAGGAAACTGTCGGACTGTAATGATTGCAGCTGTCAGCCCATCAGGTCTGAGCTATGAGGACACATACAACACACTGAAGTATGCTGATCGAGCCATGAACATTACCTGTAAGGTGGTCAGGAATGAGATGTCAGTAGATATGCATGTCAGTCGTTATGCTAAGATAGTAGAAGAACTAAGAGCTGAGATCTCTGAGCTTAAAAAGAAGGTTTTTGGTTATGAATCAGGGCCTAGTACCACACCGAAGAAATCTGCTGACTCAAATACACAGATTCAAGAACAGATATAGAGGTTAAGTTCAAGCCTGAAATGTGTGATGAAAGAGAGGATGGTAGTTCAAAAGAACATTATTGATGTTGAAGCAGCACATAGGGATCTTCATATCAAACTTTACAGAAAGGAACGAAACTTGAGATGGATGCAGATTGTGTGCATTGAAGGAGAGAAGCTTGATCAGGCACGGTCTAAGATCCAATCAAGCACAGATGCTACAAACTCCAAACAGAAATATCTAGCATCCAGGAAGGCAGACTTTGAAGGACAATTAGTAAAGAATGATTCTTGGTTAGAGCGTATTCAATCTGAGATCAGACTTGAGACTGACCCAGAAGCACAAAATCAACTGGAGAGCTGCAATTCGGAGGTGAAGCTGCAGCTAGAGAATATGGAGTTGAAAAGGAACTGTCAGCTTTATAAGAAGCATGTACAAGCACAAGAAAAAGATGCTCAGAACACAGAGAGATTGGTGTCAAAGTTGCTAAGCATGGTGCAGAAACAGTTCTTCCTGTTAAAAGGTGTTGGCCTTGCTACACAGGACTTAACAGAGGAATACAATACCATTGTTGAAATAGTTGAAAATGGACGTAAAGTGATGTGGGCGGATCAGAGTGTGAAAGAAAATGGCATCGGTGACAGGTTTTTGCCCTTAAGCTTTCACTCCACAAGTATTGGGACACCGCAAGCAAGAACACCAATCAGGAAACGTCAGTTCAATACTCCAGCTGCTGGCTCAGTCATGAGGACACCTTGTGGCCAAGCATCCATCACTTTGAAGACAAAAGCAATGCGAACATTCACTCTTTCAGCAACACCAAAAACTTGTAACAACAGGCCAAGCATTCAGACAACAGATAATTTTGACTTTGTAAATCCTTGCATTTCCTTTACTAAAGAGTTTGAGGCCATTTCACCACCAGTGAGGGCACCACTACCGATAGCACAGAGGTGTACAGGACAACAGACATTGATCCCATCAGAAATCAGCACTGTTCTATCAATCCAAAACATTGCAACACAGCTTACAGTTCCTGGATCTTTCACAATTTCAGATAACAGTGCTACTTTACCATCGGCAACATCTCAAAGCTAGATTAATTTGATGAATAATTTGTCAAACTGTGCATCAAGAAAGTCAACTCAACATCCCAAAGTTTGTTGGACTGACAAACCTGTTGAACCAGAATGCACTCCTGCTAAGCAGGCTAAAAACAAGTCTGGCCTCGCAACACCACTAAGAGAGTCTAATGATATTAATATATCAGGAATACTGCCTCTCAGAGAGACTCCTGCTGATAGAGACCAACACAAAATGTCAACAGCACAGATTAAAAGACCTCCAATGAATGATCCCCTTTCCACACCTCTCAGAGTACTGCCGGTTAACAAGCAGACAGGACTGAAAGATCAACTACCTTCTGTACTGAATCAACTAAGCAATTCTTTTAGTAAAGACAAATATAAAATCCAGAAGCAAAGTAAAGACATGATGCCCAAGAGAGTTTGTAGTGCTACAAAAGAAAATGTGCAGCTGTCAAAGAAGCCTTTAAGGTCATCAAGTGTCTTAGACCTTGACAAGCTACATTCAAAGAAAATCAAAAAACACATAAATGGATTGAGAAGAGCAGTGAGTAGCACAAATATTGGAACCAGTAGGAACTTTGCACCACGATCTTCAGCTGTTTGCCAGAGCTTACCAAAAACAAAGATTTAATTGAAATGCCTAAAAGAAGTAACTCTGTTTGTTCACGGGCTTCTACAGACAGACCAAGATGGCAGTAGTTGCAGTGTAGGAAATCTCACATTATAAGGAATATTTTACTTACTAATAGATGCTGCTGCTATTATGTTGAAATTTTTACCTTCACTGAAGGCCAGTGTTTTAGTTTTGTTTACGTTTTAAATGTATTTTTTATGCAATCTTAAAGGAAATGTCATATGAATGGCTAAGAGAAATTATAGAGGTAGAAGTGATATTTTGTGATATTACTGAAGAATTCACATTACAAAACCAAAGATAACTATTTCAGTAGCCTTTTTCAGGTTCTCAGGTAGTGGGGTAAGTAAACCATAACAACACTCAATTTTCTTCACTCACTCTTGCTTTTTTGACTTGCTCACCCCAAGCTATTTTAGAGGCTGGATTTCAACAACAGAGTCAGAGTTTTAATCAGAAGTGCAGAGCATTACTAG

Protein

Uniprot

Uniprot term	Description
Q5ZLK6	Kinesin-like protein KIF18B OS=Gallus gallus OX=9031 GN=KIF18B PE=2 SV=1
Q4KLL9	Kinesin-like protein KIF18B OS=Rattus norvegicus OX=10116 GN=Kif18b PE=2 SV=1
Q86Y91	Kinesin-like protein KIF18B OS=Homo sapiens OX=9606 GN=KIF18B PE=1 SV=4

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00225	Kinesin	Kinesin motor domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR001752	Domain	Kinesin motor domain	Interproscan
IPR019821	Conserved_site	Kinesin motor domain, conserved site	Interproscan
IPR036961	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan
IPR027640	Family	Kinesin-like protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47968	CENTROMERE PROTEIN E	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003777	Molecular Function	microtubule motor activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0007018	Biological Process	microtubule-based movement	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10393	KIF2_24, MCAK; kinesin family member 2/24	-	Cytoskeleton proteins	ko04812	deepkoala