Detailed information of gfas1.m1.18667.m1 in Galaxea fascicularis

Genomic Location: xfSc0000694:352...948
NR annotation: KAJ7392483.1, DNA-directed RNA polymerase II subunit RPB2 [Desmophyllum pertusum]
Species Galaxea fascicularis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A5PJW8DNA-directed RNA polymerase II subunit RPB2 OS=Bos taurus OX=9913 GN=POLR2B PE=1 SV=1
P30876DNA-directed RNA polymerase II subunit RPB2 OS=Homo sapiens OX=9606 GN=POLR2B PE=1 SV=1
Q8CFI7DNA-directed RNA polymerase II subunit RPB2 OS=Mus musculus OX=10090 GN=Polr2b PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001360 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04563
all species →		RNA_pol_Rpb2_1RNA polymerase beta subunitFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007644
all species →		DomainRNA polymerase, beta subunit, protrusionInterproscan

 PANTHER
No PANTHER signature was detected for gfas1.m1.18667.m1. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0003899
all species →		Molecular FunctionDNA-directed 5'-3' RNA polymerase activityInterproscan
GO:0006351
all species →		Biological ProcessDNA-templated transcriptionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gfas1.m1.18667.m1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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