Detailed information of gfas1.m1.19092.m1 in Galaxea fascicularis

Genomic Location: xfSc0000826:27757...47060
NR annotation: XP_027052560.1, uncharacterized protein LOC113679788, partial [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8VHS2Protein crumbs homolog 1 OS=Mus musculus OX=10090 GN=Crb1 PE=1 SV=3
P82279Protein crumbs homolog 1 OS=Homo sapiens OX=9606 GN=CRB1 PE=1 SV=2
Q8TER0Sushi, nidogen and EGF-like domain-containing protein 1 OS=Homo sapiens OX=9606 GN=SNED1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02140Gal_LectinGalactose binding lectin domainDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF00024PAN_1PAN domainDomainInterproscan
PF00008EGFEGF-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR050906FamilyNotch signaling pathwayInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR000922DomainD-galactoside/L-rhamnose binding SUEL lectin domainInterproscan
IPR043159Homologous_superfamilyD-galactoside/L-rhamnose binding SUEL lectin domain superfamilyInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR003609DomainPAN/Apple domainInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24044NOTCH LIGAND FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005112Molecular FunctionNotch bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0030246Molecular Functioncarbohydrate bindingInterproscan

TOP