Gene detail

Detailed information of gfas1.m1.195.m1 in Galaxea fascicularis

Genomic Location: Sc0000002:766758...775536
NR annotation: CAH3016208.1, unnamed protein product [Porites evermanni]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

gfas1.m1.195.m1

CACGACCGCCTGCCACAAACGATGCCGATCTTCATTTCATCTCGTGATTTGAGTCATGTGTAGCCGTCAGGTTTTGTTGTTGTAAAGTCTTTAGTTATCTGTCTAAATTCGTCATGTTGTCAGTACGGACGGCTTTGAGAAATCAAACCTTCAGAATCCTTGGCACAAGAAGTATATCTTTGCCTCTCAATGAACCACCAACAAACCTGGATAAAAACAGTGTTGACCTCCAAAAGTTGAAATCAGAAATTCAGAGAGTTCAAAATGATACTTTGGAAATTCCCTGTATTGTTGGTGGAAAAGAGATTTACACAGGAAACACAGCTTATCAAGTGGTGCCGTACAACCACCAACGAAAGATTGCCAAATACCACATGGCCTCTGAGGAAGTTATCAAGGAGGCAATTGATAGTGCAATGGCTGCCAGAAAGGAGTGGGAAAAAACACCTTATGAACACAGGGCTGCCATTTTTCAAAAGGTAGCCGATTTAATCACTGGAAAATACAGAATTCAATCTCTGGCAGCAACAATGGTGGGACAGGCCAAGACTGCATTTGAGGCAGATATTGATTGTGTGCAAGAGATTGCTGACTTTTATAGATTTGGGATTCATTATGCCAAGGAACTGTATGATGGCCCAGAACTTCACCAACCACGAGGGGTAATCAACAGACTTGTGTACAGAGGACTGGAGGGTTTTATTGCTGCCATTTCTCCTTTCAACTTCACTGCCATTGGTGGAAACTTGGCTGGCACTCCCGCTATGCTTGGTAACATTGTGCTTTGGAAACCTGCAACCACTTCTATCCTGGCATGCTACCTGATCCAAAAGATTTTCCAGGAAGCTGGCATTCCTGATGGTGTTGTGAACTTTCTCCCCTCAACTGGAAAGACTTTTGGTGACAGCATAACAAAGTCACCTCACTTAGCAGGCATCAACTTTACTGGCAGTGTTGGAACATTCAGGTACATTTGGAAGAAAGTAGCAGAGAATTTGGACATTTACAGAACCTACCCAAGGCTAGTTGGAGAGTGTGGAGGGAAAAACTTTCATTTTATACACACATCTGCTGATGTTGACACAGCTGTTAACTGCACCATCAGATCAGCATATGGTTATGGAGGACAGAAGTGTTCAGCATGTTCCAGACTGTATGTTCCAGAATCATTATGGAGACAGGTCAAGGAAGGTCTTATTGAGAAGCAGAAAGAGCTGAAGATGGGATCACCAGAAGACTATGACACGTTTGTGTCTGCAGTGATCGATGACAAGGCATACAAAAGCATCAAGAGCTACATTGATCAAGCCAGAGACAACCCAGACCTCAGTATAGTTGCTGGAGGGAAATGTGATGACAGTGTTGGATACTTCATTGAACCAACGATCATTGAAACAAAGAAACCTGATGAAAGAATCATGAACGAGGAAATTTTTGGCCCAGTTCTCACCGTTTATGTGTACCCTGATCAAAGGTACAAGGAAACGCTTAGCTTGGTGGATAAAACGTCTCCCTTCGGTTTAACTGGAGCTGTGTTTGGTAGAGACAGACATTTCATTCAAGAAGCCTCTGACGCCCTTAAAGATGCCTCGGGCAACTTTTACATCAATGACAAGTCAACAGGATCCGTTGTAGGACAGCAACCATTTGGAGGCGCGCGTCTTTCAGGTACAAACGACAAGGCTGGCAGTTCACATTACATCATGAGATGGGTATCCCCACAAAGCATCAAAGAAACTGTCGTGCCAGTTGAGGATTACAAGTACCCACATCAAAGCTAAGAACAGAACTTACCAACACGAACACTTCGAAAAAGAAAACAACACAAATACCTTCCCGCTAAGGGAATGTACCAAGAAAGTCATTCACTTTAACTTTATTATCTCAAAAAACAGCACAAAACAAGGGATACAATGAAATGCCAAAGCCAGAAGCCATTTCAAAGATCAATGGTGCGAGAGTTACAAACCAAACTGTATGCAAAACTAACAAAAATCATAAATAAACAAATACAAGAAGTGAATTAACTAAGCAAATAAGTGGGATAAATTTACACAAGCCATCACAGTATCTAGGGTAGACATACATTGTAGGTAGGGGAAAAAACTGAATGGAGAGATGGAAAGGTGGTGTTTTAGAGAAAAATGAAGAGAAGAAAGAATACCTACAGTGTTAAGAAGTTATCTTTGAGTTTTTGTCTATAATTAGAAAAAGTGAGAGCATCGCGTAGTAAGAGTGGGATACTGTTCCAGATGAGCGGATATGGCGACCGAAGATAAAAAGTATCCCCGTTTAGAAGATGAACGTGAAGGTTATCTCTTTGTCTGGTGAAATACCGACGGTAATCAGAGTTAAGGTTAAAGAGAGAGGGATAGGCAGAACCTTTTGCATATGAAGGAATATAAAGCAGGAGACTTGATATTTATAAATATTGAAGATATTTAGTAATTTGAACTTATTAAAAAGGGGATACGAGTGTGCACGAGGTGGAGAATGTGTCTAAAAGGATGGTATGATTCAGTGTCGAATGCGTTTTTTAGGTCAACAAAGATTCCAATAGTAAGTTCATTTCTTTCAAATGCAACAAATATTTGGCATGACTTTTTGCATCTCCTATGATGTGAGTGGAGAGAAAGAAGTCTACTCTATAACATATCTCATCCCCGTCCTTCAGCAGCTCGCCTGGTAGATAATCGGCGGAGATTCATGACGCGACAATTTTTGGTTTTCAAATTCTACGGATGGGTCCGTGAACTTTTACTTAACTGCTTCTATTGGGTTGATTCGCTGTAACAAACGAGGGTTTGTGAAAGTGGTGGCGTGTCACGGCAGAGGCTGTAGAGTGCTGACAGGGCTGATTTAATGTAACTTAATGTAATGTATTAAGGAAATGAATTAATGTATTTTATTGTCTATTTCATTCAATTCAATTTTAATGATGATGATGATGATGATAATGTCTTTAATAAACCATAAGATAAAAATATATATATCCTATGTTACATAAACAAGAGCTATGTACAAAATTACAATAATGTGGCTAAAAATAAATTATGTAATTATAACAAGTTGTGTTCAAAAATGAGTCTATTTACAAATGTGGCAATGTTGACGAGTAAATTAAATTGCTACAACGACAAGCAATTTTTTAATTGCTGATTTTTTAATTTTAATTGAATCTTCAGCCATCGGTGATTTTATGATTAAAGCAATCATAGTTAGTAG

Protein

Uniprot

Uniprot term	Description
Q7SY23	Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Danio rerio OX=7955 GN=aldh4a1 PE=2 SV=1
Q8CHT0	Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Aldh4a1 PE=1 SV=3
P30038	Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Homo sapiens OX=9606 GN=ALDH4A1 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00171	Aldedh	Aldehyde dehydrogenase family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005931	Family	Delta-1-pyrroline-5-carboxylate dehydrogenase	Interproscan
IPR015590	Domain	Aldehyde dehydrogenase domain	Interproscan
IPR016162	Homologous_superfamily	Aldehyde dehydrogenase, N-terminal	Interproscan
IPR029510	Conserved_site	Aldehyde dehydrogenase, glutamic acid active site	Interproscan
IPR050485	Family	Proline metabolism enzyme	Interproscan
IPR016160	Conserved_site	Aldehyde dehydrogenase, cysteine active site	Interproscan
IPR016163	Homologous_superfamily	Aldehyde dehydrogenase, C-terminal	Interproscan
IPR016161	Homologous_superfamily	Aldehyde/histidinol dehydrogenase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42862	DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE 1, ISOFORM A-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003842	Molecular Function	1-pyrroline-5-carboxylate dehydrogenase activity	Interproscan
GO:0010133	Biological Process	proline catabolic process to glutamate	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0005759	Cellular Component	mitochondrial matrix	Interproscan
GO:0016620	Molecular Function	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00294	E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase	EC:1.2.1.88	Arginine and proline metabolism	ko00330	deepkoala