Genomic Location: Sc0000002:692030...710954
NR annotation: CAH3038642.1, unnamed protein product [Porites lobata]
| CDS | ||||
| gfas1.m1.200.m1 | ||||
| Transcript |
| gfas1.m1.200.m1 |
| Protein |
| gfas1.m1.200.m1 |
| Uniprot term | Description | |||
|---|---|---|---|---|
| Q05048 | Cleavage stimulation factor subunit 1 OS=Homo sapiens OX=9606 GN=CSTF1 PE=1 SV=1 | |||
| Q5R8K2 | Cleavage stimulation factor subunit 1 OS=Pongo abelii OX=9601 GN=CSTF1 PE=2 SV=1 | |||
| Q99LC2 | Cleavage stimulation factor subunit 1 OS=Mus musculus OX=10090 GN=Cstf1 PE=1 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02376 | CUT | CUT domain | Domain | Interproscan |
| PF00046 | Homeodomain | Homeodomain | Domain | Interproscan |
| PF00400 | WD40 | WD domain, G-beta repeat | Repeat | Interproscan |
| PF16699 | CSTF1_dimer | Cleavage stimulation factor subunit 1, dimerisation domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003350 | Domain | CUT domain | Interproscan |
| IPR001680 | Repeat | WD40 repeat | Interproscan |
| IPR001356 | Domain | Homeobox domain | Interproscan |
| IPR015943 | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR010982 | Homologous_superfamily | Lambda repressor-like, DNA-binding domain superfamily | Interproscan |
| IPR044633 | Family | Cleavage stimulation factor subunit 1-like | Interproscan |
| IPR036322 | Homologous_superfamily | WD40-repeat-containing domain superfamily | Interproscan |
| IPR038184 | Homologous_superfamily | CSTF1, dimerization domain superfamily | Interproscan |
| IPR009057 | Homologous_superfamily | Homeobox-like domain superfamily | Interproscan |
| IPR019775 | Conserved_site | WD40 repeat, conserved site | Interproscan |
| IPR032028 | Domain | Cleavage stimulation factor subunit 1, dimerisation domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR44133 | CLEAVAGE STIMULATION FACTOR SUBUNIT 1 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0005848 | Cellular Component | mRNA cleavage stimulating factor complex | Interproscan |
| GO:0031124 | Biological Process | mRNA 3'-end processing | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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