Gene detail

Detailed information of gfas1.m1.21601.m1 in Galaxea fascicularis

Genomic Location: xfSc0002190:487...14102
NR annotation: CAH3167340.1, unnamed protein product [Porites evermanni]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

gfas1.m1.21601.m1

GCAGGCTACATTGTTACCAGCTGTTTGAGAAATCCAAATATTAATCTTGTGGAGGGGACAAACAGGTGAAATGTTCAGCATGTTCAAAGGAGAGATATCAAATACTGTATTTCTCCTTTATTTGATATCTTATAACCCCTGTAACTGTTTCAACGAGCCTCCAGCAGGGCATTTGAAGGCGTTCGGTCAGCATAGAGACCCCGATGTTGTTACAGGTGAACTCGAGATTGTCCCGCTTCCGTCAGAGTTTTGGGAAAAATACGTGTCCAAACAACGACCTGTTGTGTTTAGGGGGGCTGCTAAACAATCCAGGGCATATGAACTGTGGACAGAGGAATTCCTATTTTTGGAATATGGAAATCTCACTGTGCGACTTGAGTCACGAGCTGAAAGTAATCATAGGGTACCTGTTGGTGAACATGGAATTCTTGGACGAGACACTGTGAGGCATTTCATAAAAAACTACCAGAATGTAGATGCGTATGTCATTTCTCAGATTCCACAGCCAATGGAAAAAGATATTGGAATACCCCCTTGTCTGAGGTGTGGTTCATTTTCTGAAGCCATTCAAGAAGTCCATCTATTTCTGTCAGCACGTGGCGGCCAAACCAAACTCCACCAAGATCCATATAATAACATACATTGCATATTTAATGGTACTAAAGATTGGCTTCTCGTTCACCCAGATCAAACGGATCTTGTATACATGTCTGCGGATTCTGAGTTCGAATGGGGTGGATACTCTGAGGTTGACATCTATTCTGTGGATCTGGAAATGTTTCCAAAAATTAGAGATGTTCATTTTTCCAAAGTGACAATGAACAAGGGCGACTGTATCTTTATGCCAGGAGGATATTGGCATCAAGTCCGCTCCTGGGGATATATGAATTCAGCAGTGTCCATTTGGTTCTCACAGTTGAAGCATTTCACAAATCAGGACTGCAACAAAGTAGAAATTTCCTTTACACCTATGGACCAGGTGATGGTCCTTTGGCGGTACTCTGGATATGGTAGCCTGACTCAAGGGCATATGGATATTCACATTGTTAAACGATTTCTATTGACATTAGCTGATGGCGAAGGAAAGATCTGGCTAGACAACTTTGTAGCAAAGTACTTTAAAAGTGAAAGTGACCACAAGAGAGATTTAATGAGGGAACTTGAACAGGAAATGGCAAGAGGGTTGGTTGCCTACCTTGACCCTAATGGCAAAGGCTACATCACAAAAGAATATGTACAGAATCTTACTATTCATCAAATGAAACAAATCTTGCTATTTGTTGACCCAAATGATGTGTCAAACACTGAAGAACTTGAAGATTTGTTGGTACGGTGCTATGATAGCAGAGGAATCTTTGATAAAGACAAGTTCGTGTCAAGTTACATTGAGAACCTTGGAGGAACTCATAAAAAGGCTTTGGAGATTGTGGAAAACCTTGGAGCAACCAACGAAGAGGTTTCGCTGGCTGAGATTGTAGTCCAGATACCACAAGCCTTGCACAAGTTTCACAGTTCAAGAGTGCATGATCCCACATTTGAAAGGAAAATGTTTCAACATCTACATGAGCATGACGAGCTTTGATCCTATAACTTACGTAGTCTGCGTGGTAGGCGTTCGAAGGATAGGCTAATGGGCGCACTTCTGTCAACCTCGCAGCTAAACAGTTATAATAATAATAGTAATAATAATAATAATACTCTGTTATTTATTTAGCGCACCCTCGAAAATTGCCCAAATGCGCTTTACATACAAGTATATATATATACAATTCAAAAAAAAGAAAAGAAAAACCAGAACCATTAATATTATGCAAATTTAAAAAGATGTGTCTTGAGTCTCTGCTTAAAGATTGCAATACTAGGACTACAGGTAATTTGTCCCACATACAAGGAGCGCTAACCGAGAACGCTCTGGACCCGTAAGTTTTGGTATGATACGATGGCTCGCAAAAAAGCAACTTGTCGGCAGATCTAAGATCTCTTGTTGGGACATCTGGTACAAGCAATTCACTCAGGTACATTGGTGTCAGACCTTTAACAATCTTGTACGTAAACAATAAAATCTTGA

Protein

Uniprot

Uniprot term	Description
F4K2M8	Lysine-specific demethylase JMJ31 OS=Arabidopsis thaliana OX=3702 GN=JMJ31 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13621	Cupin_8	Cupin-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR003347	Domain	JmjC domain	Interproscan
IPR041667	Domain	Cupin-like domain 8	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12461	HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016706	Molecular Function	2-oxoglutarate-dependent dioxygenase activity	Interproscan