Gene detail

Detailed information of gfas1.m1.2802.m1 in Galaxea fascicularis

Genomic Location: Sc0000109:52789...59701
NR annotation: XP_044173935.1, 39S ribosomal protein L15, mitochondrial-like [Acropora millepora]
Species abbreviation GFASC · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5ZKT8	Large ribosomal subunit protein uL15m OS=Gallus gallus OX=9031 GN=MRPL15 PE=2 SV=1
Q0VC21	Large ribosomal subunit protein uL15m OS=Bos taurus OX=9913 GN=MRPL15 PE=1 SV=1
Q6AZN4	Large ribosomal subunit protein uL15m OS=Xenopus laevis OX=8355 GN=mrpl15 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005029 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00828 all species →	Ribosomal_L27A	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005749 all species →	Family	Large ribosomal subunit protein uL15, bacterial-type	Interproscan
IPR036227 all species →	Homologous_superfamily	Large ribosomal subunit protein uL15/eL18 superfamily	Interproscan
IPR030878 all species →	Family	Large ribosomal subunit protein uL15	Interproscan
IPR021131 all species →	Domain	Large ribosomal subunit protein uL15/eL18	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12934 all species →	50S RIBOSOMAL PROTEIN L15	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005762 all species →	Cellular Component	mitochondrial large ribosomal subunit	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0015934 all species →	Cellular Component	large ribosomal subunit	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02876	RP-L15, MRPL15, rplO; large subunit ribosomal protein L15	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.