Gene detail

Detailed information of gfas1.m1.3163.m1 in Galaxea fascicularis

Genomic Location: Sc0000131:145676...150874
NR annotation: XP_015772983.1, PREDICTED: solute carrier family 25 member 36-A-like isoform X1 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

gfas1.m1.3163.m1

GAATTACCAATCAAAAACGTAGTCCGTTGATATCGTAAAATGGTGGCCATGTGATAGTTTGTGCTGGGAACAGGAACGCACGCTAGCAAATAAAGGACAAGGTTCGTTGTAAACATACTTGTTTGTACGGTTGAAAGTTTTGACGCCCGGTGGGACGAAGGAAGATTCATTTGTCTTTCTGAACGAAAACCAGCCGAAAATGAAGGGTGGACAGCCTTCTTATGTCCACCTAGTGGCCGGCGGGGTTGGAGGAACTGTGGGTGCTTCACTGACATGCCCTCTGGAGGTTGTAAAAACAAGACTACAGTCATCAGTACCAACCTTCAGACCTGTATTGTGCCCAACGGCAAGTGGATCAGGAGTTTGGAGTATCCCAGTAGAGATTTCTGTCCCAAGACCTGCTGGTATCCTGTCGTGTTTCAGACATATTGTACAAACAGAAGGAGTTGCTGCATTGTTCAAAGGCATAGGACCAACTTTAGTGGGTGTGGCACCATCAAGAGCTTTGTACTTCTCAGTATATGCTAAAGCTAAACATGTATTAAAAACGAGTGGTGTAGTGTCACCAGACAGCAAGTTTGTACATGTTGGTTCAGCTTGTTATGCAGGTTTTGTCACATCAACAGTGTCTAGTCCACTTTGGGTGTTGAAAACAAGACTGCAACTGGATAACAGGGCTGCAACTAGAGGACAGATTGTGGAACTTATTAACAGTATCTGGAAAACTGATGGATTGAAAGGCTTTTATCGAGGATTAACAGCAACATATGTGGGGATAACAGAGACTGTAATTCATTTTGTGATTTATGAACATATTAAGGGAGAAATTGAAAGGCTTCACTTGAAAGTGCGGGGTACAAGTGAAAAGAAAATCACTGACTTCATTCAATATATGATGGCAGCAGCAGCCTCAAAGTGTACTGCAGCTGTGGTTGCATATCCACACGAGGTTATCAGGACCAGACTGCGACAACAAGAGATTGATGGAAAGAGAAAATACCACTCAGTCTTTCAGGCCTTTAGGAAAATATTTCATGAAGAAGGTAGAATTGGACTCTATGGTGGGCTTGGAACTCACCTTCTTCGACAAGTACCAAACACTGCAATCATGTTTTTGACTTATGAAGCTGTCGTGCATTGCCTGGCCGAGGATGATCTGCCATGAATCAGCCTTATTGGCAGGATATTGATTCTTTCATCAAAGATGCTTATAGATTAAATATATACACCATTACCATCATTAATAAGATTAAGTATAATTATGAATTCTGGGTATTATATAAGATATTAAGTTAATGAAAAAAAAACATCTAAGAGATATTGTACAAACTATGCAGGTAATCTTGTATTTAAAGAATTTGAAACTCTCTCTCAAATTTTGATGTTGTATTATTTTAATTTGTGTTTGTAAATACTAGTTTTATAGCATATGTACATAACAGATGTGAAGAAGGTACCTCAGTACGCATACAAAAGGATAATTTTATACTTTCCAAGTTTTATTTGACAAGAATATCTGACATGATTACAGTAAAAATAATTAGAAAGGAAATTTTAAGGGCCAACAAACAGTTTTAGTGTTGCTCATGTTTAAAGGATCAAAGTTGTGAATTTTCTTATCTTGAGAAAATAGAAGTCAAGGAACAACTGAAGATTACTTTCCGGTTACATGTAGTAATGTTATCTATAGGGCAGTTGCTCATCTAACTAGGACCATCAACTTAAGAAGTTTGAAAGATGTAAAAGGGAGATTGCCAAGGCTTTCTTTAACTCACAGTCAGCATTCCAGGTAAGGGAGGGATCTCGGTCAAAATCAGGGGAAAGATTTAAGGAGAGACTTTCCTAGTGACTCCTTTTCGTTATCTTATCAATCTCCCTCGGACACTGACTGTGAAAGGCCAAGTGGCATTGTTCAACTTGCAACACTATTCCAGGGTCACCCTCGGTGTAAAAACATGATGAGGTTTCCTTTGTTTTATGAGGTATTGTTTTCCTGTACGCTATTGTTTACAATGTTTTGTTGTCTTTGTTTTACGTCACTTGTGA

Protein

Uniprot

Uniprot term	Description
Q6DG32	Solute carrier family 25 member 36-A OS=Danio rerio OX=7955 GN=slc25a36a PE=2 SV=1
Q922G0	Solute carrier family 25 member 36 OS=Mus musculus OX=10090 GN=Slc25a36 PE=2 SV=1
Q96CQ1	Solute carrier family 25 member 36 OS=Homo sapiens OX=9606 GN=SLC25A36 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00153	Mito_carr	Mitochondrial carrier protein	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR023395	Homologous_superfamily	Mitochondrial carrier domain superfamily	Interproscan
IPR049562	Family	Solute carrier family 25 member 33/36-like	Interproscan
IPR018108	Repeat	Mitochondrial substrate/solute carrier	Interproscan
IPR002067	Family	Mitochondrial carrier protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45829	MITOCHONDRIAL CARRIER PROTEIN RIM2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000002	Biological Process	mitochondrial genome maintenance	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0015218	Molecular Function	pyrimidine nucleotide transmembrane transporter activity	Interproscan
GO:1990519	Biological Process	pyrimidine nucleotide import into mitochondrion	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15116	SLC25A33_36, RIM2; solute carrier family 25, member 33/36	-	Transporters	ko02000	deepkoala