Gene detail

Detailed information of gfas1.m1.3268.m1 in Galaxea fascicularis

Genomic Location: Sc0000138:5907...21685
NR annotation: CAH3176183.1, unnamed protein product [Porites evermanni]
Species Galaxea fascicularis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

gfas1.m1.3268.m1

AAAAAAATCATCATTTGCTTTCAGGGAAAGACTGTTTATAGATTTGTTCTTGAAATGGATTTGATGCATTTGCTGGATTTTAATGCTGAACTTGGAAACCTGGTAATTCTTGAGCCTCTGAGAGCCATTCATTTGTTTCAAGAGGTCTGCTATGTCACAATTCACACTCTGTCATGGATTCCACGTTTACAGCTTCCATCTCAAGTTCTGGCCATTGTCAGATTTTCTTCTGTTTCTCTAAGGAAAAAGTGTTACAGTTGTAAGAACTTTGCTGGGCTTGGTCAGCCAAATCTGGTAAAGATTGTTGGTATTGTTAGTGGAATGACAGCTGTCACTAAGTATACCCAAAGAGCCAGATTCTATTGTCCTCAATCCGAGTGCTGCGGTTCATGTAAACACTGTTACATCAGAGTTCATTTAGCCGGAAAAACGGAGGATGTTACAGTTAGAGGTGACTTTTTGTGTCGGTATTGTGGTCGCTCTCTCGTTGAAGATGTCACTTGTCGTACTTTAGCAGATAAATGCATTGTACAAGTTATAAGTCCTTTAGCCGTGGATAAGAAACTTTGGATTAACAATTATGGGAAACTCTACCAAGCAGTTTCAATTTATGTGCGAGAAGTTCAGATGGGTAGTCACTATTCATTTGTCGTTTTACCATCTTGTGAAATCAACGAATCTTCTGTACATTTCCAGTGCAATCCGCTCTTTGAGGACGATCTTTCTTCACAGGCAAATAACATAGAAAGGGTTGGTTCTATCTCTTCGCTACTGCCGCGGAATCTTCCAGAGAGGATAGGGTTGTTATATAAAGACAGGAAGGACTCACCTTGGAGTTTAGTTTGCAGTCTGGCTTATTGCTTTGGAGGTCGTGTAGTACCTCCTAGCTCATTCTTTCAATTGAAAATGCTTATGCTAATGTGCCTCGTGCTACCCCACTGCCCTGAATCCATGGAGGATAATAACCCAGTCCATTCCAAGAGTCAGCTTCACTTACTTGTTATTTCTGAGGACCTTCTCATGTTACAACGGCTTTTGCTATACGGCGCTTCATTTGCTAAGAGAATGATTGTGTACTCTCCCATTAGTGAATTGTTTGCATCGTGTTATCGAGACCCTTTTGGTTCTGGAACTTGCATGGTCAATGCTGGATGCATTCCCTTGGCAAAAGGCGGTGTTTGTTTAATTCCTAATGTTGCTGTTCTAAAGAAGGAACAAAAAGAAAAACTTCAAAATGCCTTGGAGAACGCATCGATAACAGTGAAAGTTCCAGAAAAATACTGGGCGTGCCAAGGACAGCAGTTGTCTTTACCACTGATGTGCAGTTTGTGGGCGTGCTCGGAACCAGCCGAGAAAATCGCTCAGCAAGGAATGATTGATCCTGTATTTAATCTTGGTCAAACCTTGAAGGACTGTTCAACACTGCCTCGATCCTTTATGGATCAGTTTTCCGTTGTTTTTAACCTGAATGGCCCAAAGGAGCATTCAGATCATTCTGACGAGTTTATAAGTGAGGAGGTATTAAGAAAAGCGATGGAAAATGCAGACGACGAAGCCTCCCTTTTTATCAGGGACGAGGAATTAAACCAGTTTCTACACTACGCTGCAGATCGTAAAGTTACGCTGACTATGGCTGCACAGGATCTTATTCAAGGTTATTACTTGGCGAGTAGACGGACCAGGAACTCTTATACAGCGAGTGGCTCCGATTTTCCAGTCTCCGCTCTAAAAACGTTAAGCAGCCTGGCTATTGCTCATGCGAAGTTAGCTCTTCATTCGGAGTGGCTCGATAAATCGAACCGCACAATTTTTGTCGCTCAGTATGGGGACAAGCTCATTGGTCTGAGAGCGATACACATCGTGGATGAAGGGAAAACATTTATCAGCCAAGGCTTGCGGATTCATCCGAAATTCAGAGGGTTGGGATTGAGTTCTCGGTTGATCGAGGCTATTCACCGCTACATACGGCGTGAATATCCCAATGTCTGCCGAGAACGCTTTACAACAAAGTCCGACAACATCGAACGACTTGCCATCCAGAAGAAGTACGGTGACACAGGCTTGTTTGAACGTGACATTTTGGCCTATTACGTTCGCAAGGACACTTTGAAGGGACAGACATTAGACGAAATAGCAGATACTTTTGACTTGAATGTCAAACCATGTACAAGAAGCTTCCTTTACGATTGCATCCTCGATGACTCCGTAGCAAACATGTTTCCAGGCCGTACCATCATCGTCGACTGGGAGCCCTTCGAGGCTCTCCGATCTAACATCGATTGTATTTTTGAGGATGACGACTGCGTGTTCTCTGACCGCGATGCTTCCGACTGCTCTGGTGGTCAGTTACCGAAGTCATTTGCCCACGGTCGGCGTTCCCCCCGAGTGAAGCACATGCATTGGGTGGCGTCCATTTACGCGGAGGACCCGGCACAGGAACCAAAGCTAAAGCTGGTCATTGAGACTCCTATAACGTTTGCTTTGAAGGTTTGGGAACAAGATGCAGTGGCGGCAATAGCACTGTACGAAGACTCCATAACATGGAAATATGGGAATTCTAGTCTTGGTCCTTTGGACCTTCCTTCAGCAGATTCTGATGTCTCAGAGTTCTTGGGTCCGAAGAATGACACCAGGATGCTACAGATCCATGCTAGAATTCGACGCTTCTGCTCGACCTTTAAAGATGTCTTGTCCACATCCTTCAGAGCGGAATTTCACGAAGAATAA

Transcript

gfas1.m1.3268.m1

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q4G0Z9	Minichromosome maintenance domain-containing protein 2 OS=Homo sapiens OX=9606 GN=MCMDC2 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004345 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00583 all species →	Acetyltransf_1	Acetyltransferase (GNAT) family	Family	Interproscan
PF00493 all species →	MCM	MCM P-loop domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016181 all species →	Homologous_superfamily	Acyl-CoA N-acyltransferase	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR000182 all species →	Domain	GNAT domain	Interproscan
IPR012340 all species →	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR052668 all species →	Family	Histidine N-acetyltransferase	Interproscan
IPR001208 all species →	Domain	MCM domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47403 all species →	LOC100145250 PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016747 all species →	Molecular Function	acyltransferase activity, transferring groups other than amino-acyl groups	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0032508 all species →	Biological Process	DNA duplex unwinding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for gfas1.m1.3268.m1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.