Gene detail

Detailed information of gfas1.m1.3492.m1 in Galaxea fascicularis

Genomic Location: Sc0000151:89082...94669
NR annotation: CAH3157333.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

gfas1.m1.3492.m1

ATGCCTGACATTTCAAGATGTGTTGAAAAAGAAGGAAATGCGATAAACATGGCGTCACCTTTAGCAGCTTCGGAGGAAAAATCGAACGGCACAAGACTGGCACGGCTTCTAATTGATGGTGGGACACACGTTCTGAGAGAAATTTTTACTGCAATTCATCCGTACCGAACCTTACAGGCCGTGCTCAATGCTAACGCTGGCAGGCTTCAGACCATCAGAACGAGACGTGTGTTACATGAAACCCAGTGGAAAAAGCTCTTTCCCTCGTCTGGTGACACAGCGGATCCCAATACATTTGATGTAACGCTTCTGCATTTGTTGCTGCGAGAAATCTGCCAACTAAACGCACCTTCAACGGGATGGCACAACATGCCTGCACCGAGCGACACCAGTCGCGAAGCAAACATCGTCAGAATTAAATGTTTCCGAAATGAATTGGTTCACAATTTTTCCACTTGCATTGCAAGCGGTGACTTCGAGGGCAAATGGAACAAGATATCTGCATCTTTATTAGCACTGGGGATGGATCCAGTGGAAATACAACGTTTAAAGATTGAACCCATCGATCACAACATCGAAAGTATGGTGGAGGAAGAAGTCACAAAATGGAAACTTGAATTTGAACCACGCATAGAAAATCTGGAGCAAGACGTTCAGCAGATGAAAGGCGAAATCACGAGTATTCAACAAACCATTACACCGGACACAAACAGGGAGAATATAAATTGCCTTCCAGATGACGTTTCAGACGTCTTTGGACGTCAAGAAGAAATACAACACGTTGCCGAGCTTATCCAAAGGGGACAAGTTCCTGCTGTTGTGATAACTGGTGGACCTGGATTTGGAAAGACAACTGTGGCTAAGAAAGTGTGTTATGAACTCGCTGCCGACAGAGAAAACAAAACGGCAGTTTTATACTGCTCTCTCAGATCCAAGAAAAGTCTAATGGATGTAGCTATCTCCATGATTCTAGTGTGCAATGAAGCCTCCTCTAAACCGCCTGCGAATCCTCAAAATTGGCTTCTCTTCTGGAGCAAGCAACAAAGACAACGTGTCACTTTCGTTCTGGACAATGCAGACGACATTCTCGAGTCAGAAGACGTAAATCACTTTAAAAACATTTTACGCGACATGAGAAACTCGTCCCGACATAATGTGAATTTCGTCATCACTTCTCGAAGAGCATTTAAAGTCCCAGATCTGAGGATAGAAGAGAAGAGACTGGAATCGCTTTCCCCCGAAGATGCGAGGAAGGTTGTTTTAACACATGTCAATGACCCCGATATCAAGCAAAGGCTCGTAAAAACAGAGACATTGGTTACATTATGTGGCTGTTTGCCCCTAGCGCTTTGTATCGTTGGATCATTGCTTTCAGACTTCACCGAAGACGAACTGATACATAATCTTACGAAAAAGCCCCTAAGAGTTCTTCGAGACGATGAAAGCGATTGCAACTCTGTGGAAAACGCAATCAAGATGTCCTTTGAATATTTGCCCGAAAATGAACAAGAGGCCCTGGTTGTTATGTCCGTTTTCCCTGGATCGTTTGACTCTAATGCCGCGAGGGCTGTGATGTCACCCAGCATGAACTCTAGCGATCAATCAGTATCAGTTCTTCGTTCACTTAAAAACCGGTCCCTTGTTCAGCAACCTGCATCATACAGATATGAAATCCATCCCCTCATTCAGGCGTATGCAAAGAAGATTGGACGAGAAAACAATAACCACAATGAGCGTGATGAGGCCGAAAAGAAGCTGAATGAAGCATTGAGTTTACTTCGTGAGCACCTTGGCAACCATGTCATGACTGCTGAAGTGTGCTCCGCTCTTTCAGATTTTTATCTCTTTCACGGTGAGAAAGACCTCGGGTCAGAAGAAGACCGGCAGAAATCTTTCAACTTAAACAGAGAGGCTCTAGAGATGATGGAGCTGCTTGGCATGAGGGACCACAAAGTGTGCATACTGATTCTTGCCAACCTGGGCCTCTCTTACCAGTTACAAGGCAACTGGGAGGAAGCAATGAAATTGTATCAGGAGTCCCTGTGTAATGCAGAACGTGAATTGGAAGCCAATCATAGATGGAAGATTTACGTCAAAACACAGATGGCGTTTTGGTGGAGAAAGAAAGGAAGTATGGAGGAGGCCAGAAAACTGAAGAACGAGGCCATGAAGATGAGTGAAGATCTCAGATTACCAGACAACCAACCGCCTAACAAGTTTCTGCTGCAGAAAATCTTGCCTTAA

Transcript

gfas1.m1.3492.m1

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18738	HEPN_DZIP3	DZIP3/ hRUL138-like HEPN	Domain	Interproscan
PF13424	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan
PF00931	NB-ARC	NB-ARC domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR042197	Homologous_superfamily	Apoptotic protease-activating factors, helical domain	Interproscan
IPR041249	Domain	DZIP3-like HEPN domain	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR002182	Domain	NB-ARC	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47691	REGULATOR-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0043531	Molecular Function	ADP binding	Interproscan