Detailed information of gfas1.m1.3901.m1 in Galaxea fascicularis

Genomic Location: Sc0000181:99525...100565
NR annotation: XP_029188133.1, UDP-glucuronic acid decarboxylase 1-like [Acropora millepora]
Species Galaxea fascicularis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q0P8I7GDP-D-glycero-alpha-D-manno-heptose dehydrogenase OS=Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168) OX=192222 GN=Cj1427c PE=1 SV=1
Q9KDV3UDP-glucose 4-epimerase OS=Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=galE PE=3 SV=1
Q59083UDP-glucose 4-epimerase OS=Azospirillum brasilense OX=192 GN=exoB PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003952 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01370
all species →		EpimeraseNAD dependent epimerase/dehydratase familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001509
all species →		DomainNAD-dependent epimerase/dehydrataseInterproscan
IPR036291
all species →		Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR050177
all species →		FamilyBifunctional lipid A modification and metabolic enzymesInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43245
all species →		BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNAInterproscan

 Gene Ontology
No Gene Ontology signature was detected for gfas1.m1.3901.m1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K06989nadX, ASPDH; aspartate dehydrogenaseEC:1.4.1.21
Nicotinate and nicotinamide metabolismko00760deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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