Detailed information of gfas1.m1.4508.m1 in Galaxea fascicularis

Genomic Location: Sc0000225:18515...32327
NR annotation: XP_027056305.1, uncharacterized protein LOC113683279 isoform X2 [Pocillopora damicornis]
Species abbreviation GFASC · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A5DCB6Trimethyllysine dioxygenase OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=PGUG_00921 PE=3 SV=2
Q19000Probable gamma-butyrobetaine dioxygenase OS=Caenorhabditis elegans OX=6239 GN=gbh-1 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005841 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02668
all species →		TauDTaurine catabolism dioxygenase TauD, TfdA familyDomainInterproscan
PF06155
all species →		GBBH-like_NGamma-butyrobetaine hydroxylase-like, N-terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR042098
all species →		Homologous_superfamilyTaurine dioxygenase TauD-like superfamilyInterproscan
IPR050411
all species →		FamilyAlpha-ketoglutarate-dependent hydroxylasesInterproscan
IPR003819
all species →		DomainTauD/TfdA-like domainInterproscan
IPR010376
all species →		DomainGamma-butyrobetaine hydroxylase-like, N-terminalInterproscan
IPR038492
all species →		Homologous_superfamilyGBBH-like, N-terminal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10696
all species →		GAMMA-BUTYROBETAINE HYDROXYLASE-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0045329
all species →		Biological Processcarnitine biosynthetic processInterproscan
GO:0016491
all species →		Molecular Functionoxidoreductase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K18246CA4; carbonic anhydrase 4EC:4.2.1.1
Glycosylphosphatidylinositol (GPI)-anchored proteinsko00537deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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