Gene detail

Detailed information of gfas1.m1.4928.m1 in Galaxea fascicularis

Genomic Location: Sc0000260:97628...101756
NR annotation: CAH3030609.1, unnamed protein product [Porites evermanni]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q5RJS9	Ribosome production factor 1 OS=Rattus norvegicus OX=10116 GN=Rpf1 PE=2 SV=2
Q9H9Y2	Ribosome production factor 1 OS=Homo sapiens OX=9606 GN=RPF1 PE=1 SV=2
Q5R631	Ribosome production factor 1 OS=Pongo abelii OX=9601 GN=RPF1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04427	Brix	Brix domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR044281	Family	U3 snoRNP protein/Ribosome production factor 1	Interproscan
IPR007109	Domain	Brix domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22734	U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000460	Biological Process	maturation of 5.8S rRNA	Interproscan
GO:0000470	Biological Process	maturation of LSU-rRNA	Interproscan
GO:0005730	Cellular Component	nucleolus	Interproscan
GO:0006364	Biological Process	rRNA processing	Interproscan
GO:0030687	Cellular Component	preribosome, large subunit precursor	Interproscan
GO:0042134	Molecular Function	rRNA primary transcript binding	Interproscan
GO:0019843	Molecular Function	rRNA binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14846	RPF1; ribosome production factor 1	-	Ribosome biogenesis	ko03009	deepkoala