Detailed information of gfas1.m1.4948.m1 in Galaxea fascicularis

Genomic Location: Sc0000261:149839...162909
NR annotation: CAH3139043.1, unnamed protein product [Pocillopora meandrina]
Species Galaxea fascicularis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q63342Dimethylglycine dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dmgdh PE=1 SV=1
Q9DBT9Dimethylglycine dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Dmgdh PE=1 SV=1
Q9UI17Dimethylglycine dehydrogenase, mitochondrial OS=Homo sapiens OX=9606 GN=DMGDH PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002587 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16350
all species →		FAO_MFAD dependent oxidoreductase central domainFamilyInterproscan
PF08669
all species →		GCV_T_CGlycine cleavage T-protein C-terminal barrel domainDomainInterproscan
PF01266
all species →		DAOFAD dependent oxidoreductaseDomainInterproscan
PF01571
all species →		GCV_TAminomethyltransferase folate-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036188
all species →		Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR027266
all species →		Homologous_superfamilyGTP-binding protein TrmE/Aminomethyltransferase GcvT, domain 1Interproscan
IPR032503
all species →		DomainFAD dependent oxidoreductase, central domainInterproscan
IPR028896
all species →		FamilyAminomethyltransferase-likeInterproscan
IPR029043
all species →		Homologous_superfamilyGlycine cleavage T-protein/YgfZ, C-terminalInterproscan
IPR013977
all species →		DomainGlycine cleavage T-protein, C-terminal barrel domainInterproscan
IPR006076
all species →		DomainFAD dependent oxidoreductaseInterproscan
IPR006222
all species →		DomainAminomethyltransferase, folate-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43757
all species →		AMINOMETHYLTRANSFERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K00315DMGDH; dimethylglycine dehydrogenaseEC:1.5.8.4
Glycine, serine and threonine metabolismko00260deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP