Gene detail

Detailed information of gfas1.m1.5021.m1 in Galaxea fascicularis

Genomic Location: Sc0000268:95191...113347
NR annotation: XP_029193473.2, kinetochore protein Nuf2-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

gfas1.m1.5021.m1

GCCATTTTGTGTTCGACTTCGTGAAAAGACTGTTAATTATGGCTGTGGCTTCAGATAAGGCGGGATTTCCAATTTTAACCAACGATGAAGCGGTTGAAAATTGTAAATCAATGTTCGGGGTTGCACTGAGTGTGGAAGATCTTCTGAAACCTCAGTGTCAACAAATGAAACGTCTGTATGCTTCTGTGTTGTCAAGCTTTGGAGTTCCAACTGAGCAATTTACACAGCCACAATTCAAGTTTATGGACAGCTTTGAACACCCAGAGCTTCATGAAGAGAGTGCTCCACTTGTCATTCTGGCTCTAGCTATGCAAAGATTTATGTACGCTTGTGGAATGGAAAATTTCAGCATTTTTGACATTGTTACACCAAAACCAAAGAAGACTCTTCATTGTATAAGTGCTATTGTTAACTTCACCAAGTTTAAAGCTTCCAGAGAACATGTTTATGATAACGCAATGGCTGAAGTGGATGCAGCTGTACAACAGAGGGAGCAATTAGTGACTCGAAACAAAGAACTACAGAAAAGAATACTAGAAATGAACTTGGAGATGAAGTTCAAGAGCTTGAGAATAGCTGCAGAAATGAAACACATACAACAACTGAAAACATCCAATGCAGAGCTCAGTTCAAAAAAGGCTGAAGTAAAAGCTAATTTAGCTGGGCTCAAGCAAGATTGTGACAGTCTCAAGTCCAAAATTGTGCAATCACCAGAAAGATTCAAAGGGGAATTGGCCCGTTTGACAAGTGCTGTGCACTCCGTCAGGGAGGCCAGAGATGAGAGAAGTGCCAGGCTGCAGGAGATCTGTTCTCAGCAGGAGAGCAATTCACAGTTTAGCGAGGATGGCCAGACAGCTCAGAAAATGATCACTGGAATTGGGCTTGACATGGATAAACTGCGTGAGGAGACTGCTAAGCTTGAAGACCTTCAGGACAAAAATATCACCCAAAAAGAAGTACTCAGAGACCTGATGGCCAAGATTGAGCAACTGCGCCGACAGCTAGCATCAAAGCAGGAGAAGCTCTCACGGTTAATGCGACAACATGATAAAAAAGTTGCTGCCACACATGACGCAAGTGATCAGCTACAAAGGGAGCAGGCACTTCTAGAAGAAAAGATGCTAGAGAAGGAAAATTACTTGGAGCAACAAAAAAACCAGTTGAAGAGCCTGTCAGTGATGGTTCAAGAAGAAGAGAATCACCATGAAGAAGAAATGGACAAGCTTCGCACGCTGTATCAACAGATGCTAGTGCAGCTTGAAAGCTACCATCAAGGACTCAACAGAGGCTGGGAGAAAGTTTTGACTGCCACAAGTAGGCGCAGAGGAATCAGTGAAAATAACTGTAACACTGCCGCTGTAGTTGCGACTGAGTCGTGTGCAGAGATAACAGAAAAAGCCGGCTCCGCTATGCTTGTTCACTGAGGTTAAAAATTTATATTACAGTTGTGTAAAGCGCACATCTGTTGTAAGATTCAGCGGACTTAACAGAGAGTTCAAAGGGGCGTGCCTCGCTGCCATTATGCAATTTGTGTATATAAAACAAGTCCCCTTTACGGTGTACCTTTTTTCACAACGTTTTCCCTCCTCTGTATTGTTAGAGGAATTGAAACAATGTTTGAACGCTTTCGTCATACGACAATGTTTTGACTATTCAAAGAAATACTCAAAACTGGCAGACGAGTTAGTTTGCCTGATCCTAACGACACCCAAATTTGGTGACGGAGTTACCTTCAAGTTGCAAAAACAACCAAGAAAAGGAAGACAGGATAAAGAAAGACAAACGAAAAAAAGAAGAAAAAAGAGACGTTAACTTGATTGCACCAGTCGTAGTCAACCAATCATAAGTTCACTGTTTTGTGAGAGAGACAAGCAGAGTTGTATATAGCCGAATGCTGTACAACGGGACTTTTTTACCACCTCGTCGACGTTCGTCTTTTTAGGTCCAGAAGCTTTTGATGTCGCTAATACCTTGAACTTTGTCATGAAACACTGAAATTTGCATTCTGTACTTATGGTTCTGTTAAAGTCAGTTTATAAAATCGTGTATAGTGTATTAAATTGCAAGTATTGCCCAGACTCGGCTTAACAAGTTGCTTTGAAATTAATTCAAGTTCACTTTACGAACCTTTGCTGCGCCTTTCTCACCACGCTCTGACTCTGCTTTTATC

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03800	Nuf2	Nuf2 family	Family	Interproscan
PF18595	Nuf2_DHR10-like	Nuf2, DHR10-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005549	Domain	Kinetochore protein Nuf2, N-terminal	Interproscan
IPR038275	Homologous_superfamily	Nuf2, N-terminal domain superfamily	Interproscan
IPR041112	Domain	Nuf2, DHR10-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0000776	Cellular Component	kinetochore	Interproscan
GO:0031262	Cellular Component	Ndc80 complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11548	NUF2, CDCA1; kinetochore protein Nuf2	-	Chromosome and associated proteins	ko03036	deepkoala