Gene detail

Detailed information of gfas1.m1.5262.m1 in Galaxea fascicularis

Genomic Location: Sc0000290:87342...103048
NR annotation: XP_020610604.1, doublecortin domain-containing protein 2-like isoform X2 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

gfas1.m1.5262.m1

TGGGAAAATCATTCGTAACTATGTACGTCACTATGGTAAACAAATCAAAATGATGGATCCCATAATATGCACATAATTACGAGGCTCAAGAGGAGGAATGAAATGCACTTACAGCGACCATTGGAAAAGACACTTGGTTACCGTCGTAATTTAAATCAGAATTTTTCAATAGAGTGAACAGATTGAAGCAGTATGGCTGCCCATGAAAGGCTAAATATGATGGGAAAGCGTTTCTATCTGCACCGAAATGGAGATCCTTTCATGACGAAGGCGTGTGTGGTGAACCAGCGAAGTATTAGAAGTTTTGAATCTTTCCTCGGATACGCTGGGGATACCCTTCGCGTGCAGGCTCGTGAAGTAAGGACTCCTGGAGGAAGACATCGTATAAAAACGCTTGACGATCTTCATAGTGGCTGTAAATACGTGGTTGTGCCAGGAAATGAGCGGTTCAAGAAAATAGAATACGACGGAAGCGAGATCAAACCTCCTCGCCTACAACCGGTAAAGCTTCCACAGATAAGTTTTCTTCAACTTAATCATCGTAAATTTGGGAATATCCCAGGCAGAGCTCGTTTAAGAGGCCAGAGGAAAAAAGAGGAGACCAAAACGATTGTTGTTTTTTGCAATGGAGTTGTGGCAAAACCCAAAAGGGTCCAACTAAAGACTGACTTCAAGATGTACCAAGTCCTGGAAGCTGTGAATGACAAAGTGAGCCAGGTTAGCAAAAATGGTGCGGTGTTCAATTTATTCACAACTGATGGACGTCACAGGATAATAGAGCCTTCTGAGCTGGAGGATAATGGGCAATATGTAGCAGTGGGAAGAGAATTATTCTTTGATAGAAGTGTACCTTATGATGATCAAGGAGTAACCTCTCAACTAACTCCCAGGAGAGCTTCTATTAAACCAAGAATGTTTGAAGTAAAACCATCCAAGAAAAATAGAGGTGTTGCAAAAAGAAACACAAAAAAGAAGTCGCTGATACCAGATGACAATGAAGCTAATAATACAGTTCTTCCAGAGATTGCGTCTAGATTTGACAACGGCAACACAACTCCAGAATTTATCAAGGACACTGAACCTGCCCAGGAGTATGAAGACTCGTATTCAGTTAGAGATGAGGGCCTCATTCCAGATCATATCGAGGAACCGCTGCGGGAATATGCGGAGCAAGCAAGACGAGATTCTGTTCAAGAACAAGAAATGGAAGACGTTCCTTTGGAAGAAGACGTCAAAGAGGAAGTAGCTGATGTGCTCGGTGATAATGGCGTTCCACTCCAGGAAGCAATTGATGACAAAGAAAACGGTTCAGTCAGCGGTGGGCGAGTATCACGGGGTTCTTCACCCAGAATGGATGAACACCAAGCAGAATATGAAGGAGAGGGAACATCGCAAGGCCGTGACTCCAGAAATGAAGAACCTCAAAAAGACCATGAAGTGCAACCCTCCGTGTATGAAGCCAGTGGCGACAACAGAGTAGATGCCGCGGAAATCCTCGACGACAAAGAAACTGTGGAGGATAAACCCATTGATCAAATGCCAGCTGAAGAGGTGGCTGACGAAGAAATTGAGGAAAGTAATGAAAATAGGGGGGATGTTGAGGAAGGAGAAAACAGTAGACAACCTGAGGAGGATGTACAAGAAGACATTAAAGAGAACAAAGATACAAACGATAAAGACAGCGAACCAACTCCTCAAGAGGAAAACGAAGCAAATGAAGTCCTACAGTGAAGATAAATATTTATTATTAGAATCGTAGGTAAAAGGAGACATGGCCTCTGTAAATCACAAAATGTTTCGCGCCACATATAAGATAAAAGTTAACAGTCGCTAACGTTATTGTTTCTTGATGGATCCAAAAAAAATCTCTTAATGCCTTTCTACTTATTTTATGTGTTCATGGCATAACTTATAAAAATATAAAGGGCGAATTGTATGAGTAATGTACAGTGATTAGTTGAAAGTATAATCGTCAGCTCATTAATGAACGAGTTTCTTCGGCCCCAGTTCAAAGGCTTATTTCTTGCAAGTGTCCAATGAAAACTCTCGGTATGTATGGTGTTACACAATACGAAATCCTTTAAACGCTGCAAGGCAGTACATTCGTAACTTATGTTTGTTTTATGGTTTCTGGAAAGTGAAATATTATAACAGTAAGTGTTGGCGATGTTCAACTGACTGGCTGATTTTCCAAGACGAATCAGTTCTCAGGTTACATGGGATAACACAGGGCACCGGTCTGGGTCAAGATATGCGAAGGCAGTTTTCGAGTGTCTTCGCTACCGGGGACAACACTAGCGGTAACGAGATTGTGTCGCTAAACGTTTGTAATGAACTAATTAATTTGTCTACAATCGCCCAATAACTCGTGGTACGTTTATTGGCCGTTTTCTTTTGTGGAACAGCATGAAATTGCTAAACGTATCTTTAAGTGATTGTTCAGGAAATACGGTAACGTTGAAACTCGTTCACTGTAAACGTGTAACGGACCGTAACTGGTGTGTTGTTGGAAAAGGAGAGGGGGG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03607	DCX	Doublecortin	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003533	Domain	Doublecortin domain	Interproscan
IPR036572	Homologous_superfamily	Doublecortin domain superfamily	Interproscan
IPR049626	Family	DCX/DCDC2-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23004	DOUBLECORTIN DOMAIN CONTAINING 2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0035556	Biological Process	intracellular signal transduction	Interproscan
GO:0005815	Cellular Component	microtubule organizing center	Interproscan
GO:0005874	Cellular Component	microtubule	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K23405	DCDC2; doublecortin domain-containing protein 2	-	Cilium and associated proteins	ko03037	deepkoala