Detailed information of gfas1.m1.5411.m1 in Galaxea fascicularis

Genomic Location: Sc0000304:111016...137464
NR annotation: CAH3017654.1, unnamed protein product [Porites evermanni]
Species Galaxea fascicularis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9NRR4Ribonuclease 3 OS=Homo sapiens OX=9606 GN=DROSHA PE=1 SV=2
Q5HZJ0Ribonuclease 3 OS=Mus musculus OX=10090 GN=Drosha PE=1 SV=1
O01326Ribonuclease 3 OS=Caenorhabditis elegans OX=6239 GN=drsh-1 PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002885 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00636
all species →
Ribonuclease_3Ribonuclease III domainFamilyInterproscan
PF14622
all species →
Ribonucleas_3_3Ribonuclease-III-likeFamilyInterproscan
PF00035
all species →
dsrmDouble-stranded RNA binding motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000999
all species →
DomainRibonuclease III domainInterproscan
IPR036389
all species →
Homologous_superfamilyRibonuclease III, endonuclease domain superfamilyInterproscan
IPR014720
all species →
DomainDouble-stranded RNA-binding domainInterproscan
IPR044442
all species →
DomainRNase III, double-stranded RNA binding domain, animalInterproscan
IPR011907
all species →
FamilyRibonuclease IIIInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11207
all species →
RIBONUCLEASE IIIInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004525
all species →
Molecular Functionribonuclease III activityInterproscan
GO:0006396
all species →
Biological ProcessRNA processingInterproscan
GO:0003723
all species →
Molecular FunctionRNA bindingInterproscan
GO:0031054
all species →
Biological Processpre-miRNA processingInterproscan
GO:0006364
all species →
Biological ProcessrRNA processingInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0031053
all species →
Biological Processprimary miRNA processingInterproscan
GO:0070877
all species →
Cellular Componentmicroprocessor complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K03685rnc, DROSHA, RNT1; ribonuclease IIIEC:3.1.26.3
Chromosome and associated proteinsko03036deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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