Gene detail

Detailed information of gfas1.m1.5611.m1 in Galaxea fascicularis

Genomic Location: Sc0000322:4531...11349
NR annotation: KAJ7393878.1, regulation of response to stimulus [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

gfas1.m1.5611.m1

ATGGCGTTGAAATATCTGTTTCTGAGCGGCAACTCTATCAAATTCGTGGATTCGTTTACTTTTGATGGCCTTTCGTCTCTGGAACTCATAAATTTAGCAGACAATCCTTTGGAAGAGCTTAGAGATTACGCTTTCATGATCAAAAACTCTTCCCTTCATACCATTTCACCTGATCATGTGACGGACGGGTTCAAAACAAACAAGAAAGGCCTGTTTATCGCTCTTACCGAAGCAGGATTTGCTGACGGGAATAATAGCTACAGGCGTCCGTGTCCCTCGGGGACGTATTTTCCTCATCTAGAAAACTTCAAATACAACACAGCTTTGAAATCCAGATGCATTCCTTGTCCACCCGGCACTAGGACTGATCGTAATTCTGGATACAGAGCCTGCAAATGCATCGAGAACTTTCACCGCACGAACCGCTTTGGCCCCTGTGAAAGCTGTCCTTCAAAAGGTCTTGACTGTCTCAACGAGTCCGTCTCACTGAAGAAAGGATATTACTGGCACTGGGACTCAGAAGAACACAAACTAGCCTATAAAGATTTTGCCAATAACTTAAAGATAGAAAACGACTCCTACTGGAGAAATACTTCTTTTTACAACGGAACGCTTCCTAAGCCTTACCAATGTCCGCGGGCTAAATCATGTGAGGGAGGATTGGAATCTAAATGCGCCACTGGGTACTCGGGTCCCTTGTGTGAGGTGTGCGAGAGCGCATATTATAAACGGGTTCTTGCCTGTAAGCCCTGTCCCTCAGGTACCTGGGTTATCGTGCAGCTTTCTCTTCTAGGCGTGGCAGTTCTTGTGCTTGTAATCATTTTGATTTGGAGCGGCAGAAGGAAAATATCCAAAGCGAAGCGTCCGATGATTGACATTCTGTTAGCCAGACTGAAGATTGTCATTGGCTTTTATCAGGTGACATCCGGGATAGTCGAGGCGTTTGTCTACGTCAAATGGCCGTCGTCCCTATCTGTAGTAGGTGATTACGCTGAAGTGATACAGCTCAACATCCTGTCATTCGTTCCACTTCACTGTCTCTTTCCGTCATGGAAACAGAACGCGTTCAGCAAGATGTACCTCACGCTGGGAAGCAATGTTTGCGTCGCTGTAATTGCAGTTTTAGGCTACTGGATCAGAAAACTATTTCTGTTGAGTAAATTAAAAGCAAACTCCTCAAAAATGAGAATCAAGCTATCCACAACCAAGGAGTTCCTCTATCGCAACGTGTTTTTGTTTCTGTTTATTACCTACCCTAGCACGTGTTCAACGATTTTGAGGATTCTTCCGCTCGCATGTCACGAGCTGTGCACTGAAGGCTCCTGTACGCGTTATCTCAAGACTGACTACAGCATCAAGTGCGAAGGCGACAAGTATGAGTTTGTCAAGATTTTTGCCTTCGGGGCGTCTTCGTACATCGTTTTGCTTCCGGCGCTAGTATTTGTGGCTTTATGGAAACACAGAAGACAGCAACGTCTTCGCGCGCGTTCTGGTGCTGAAGACACGGAGCGGGGTAACACGGTGGGTGCTGAATTTGGTGATTACAATGTCACTGAAATGGCTGAGGAAAATACTGAAGACATCAAAGATGACGTTGAAGATGATGAGCAGACACCCAATGAATCAGAGCTCATTGCTGGGATGAGCTTTCTCTACGAGAACTACAATGATGATGCATGGTATTGGGAACTAGTAGAGGTGATAAGGAAGCTCGTTCTGACTTGTGGGATTATCCTGATTGGCCGAGAGAGCAGAGCTTACGTCGGTCTGGCCTCCATCTGTTCCGGGCTGTTCGCTATTGTTTATGCCTTCCGTAAACCAATCAGGGATGAATTTGAAGACAAACTCCAGCTCACCTCTCTGCTTGTAATATTCCTGAACCTTGGCATTGGAGTAATTCTGAAGATACCAAAAGAGTCAGTTCCCTCAGATGTGGACCAATATGTCGATTCGCTGTTGGTTAATATTCTTGTCGTTGGCGCGAATGTCTTGGTTATTGTGCTGGTTGTTGGTCGTTATATTGCCGTGTTGATTCGCAATATCGTGTTGTGGCGAAGAAATCCCCAGTGCTCCGCGGCCTGCTGTATCACCATGTTTCTTTCCTTGAACGAATTAAGCAGCGGCGTGAATTCTGTGACAGGAGGCATGCGCAAAACTGCCCTCAGAACGAACCTGGGAATTGGAGGTGTGGATATGCCTTCCATGCGTGCAGCTGTGAATGATAATGTTGGTTTTGAAATAGAAGAAAACGACGACAGAGATACAAAAGACAAAAAAGACGGAGGGAGTTGTAAAAAGGCTGCCAGTTCGATGAAGAAAGAGGAAAGTGTCAACGAAGATAATACAATCCAACAAGGGCGCAGGTTCAGCAGTCGATTTCCATCGAGACGAACAAGAGTTTTGGATTCTTAG

Transcript

gfas1.m1.5611.m1

GCTCACTAGCTTGACAAGTGGAGTGTTCAACAAGTTAATGGCGTTGAAATATCTGTTTCTGAGCGGCAACTCTATCAAATTCGTGGATTCGTTTACTTTTGATGGCCTTTCGTCTCTGGAACTCATAAATTTAGCAGACAATCCTTTGGAAGAGCTTAGAGATTACGCTTTCATGATCAAAAACTCTTCCCTTCATACCATTTCACCTGATCATGTGACGGACGGGTTCAAAACAAACAAGAAAGGCCTGTTTATCGCTCTTACCGAAGCAGGATTTGCTGACGGGAATAATAGCTACAGGCGTCCGTGTCCCTCGGGGACGTATTTTCCTCATCTAGAAAACTTCAAATACAACACAGCTTTGAAATCCAGATGCATTCCTTGTCCACCCGGCACTAGGACTGATCGTAATTCTGGATACAGAGCCTGCAAATGCATCGAGAACTTTCACCGCACGAACCGCTTTGGCCCCTGTGAAAGCTGTCCTTCAAAAGGTCTTGACTGTCTCAACGAGTCCGTCTCACTGAAGAAAGGATATTACTGGCACTGGGACTCAGAAGAACACAAACTAGCCTATAAAGATTTTGCCAATAACTTAAAGATAGAAAACGACTCCTACTGGAGAAATACTTCTTTTTACAACGGAACGCTTCCTAAGCCTTACCAATGTCCGCGGGCTAAATCATGTGAGGGAGGATTGGAATCTAAATGCGCCACTGGGTACTCGGGTCCCTTGTGTGAGGTGTGCGAGAGCGCATATTATAAACGGGTTCTTGCCTGTAAGCCCTGTCCCTCAGGTACCTGGGTTATCGTGCAGCTTTCTCTTCTAGGCGTGGCAGTTCTTGTGCTTGTAATCATTTTGATTTGGAGCGGCAGAAGGAAAATATCCAAAGCGAAGCGTCCGATGATTGACATTCTGTTAGCCAGACTGAAGATTGTCATTGGCTTTTATCAGGTGACATCCGGGATAGTCGAGGCGTTTGTCTACGTCAAATGGCCGTCGTCCCTATCTGTAGTAGGTGATTACGCTGAAGTGATACAGCTCAACATCCTGTCATTCGTTCCACTTCACTGTCTCTTTCCGTCATGGAAACAGAACGCGTTCAGCAAGATGTACCTCACGCTGGGAAGCAATGTTTGCGTCGCTGTAATTGCAGTTTTAGGCTACTGGATCAGAAAACTATTTCTGTTGAGTAAATTAAAAGCAAACTCCTCAAAAATGAGAATCAAGCTATCCACAACCAAGGAGTTCCTCTATCGCAACGTGTTTTTGTTTCTGTTTATTACCTACCCTAGCACGTGTTCAACGATTTTGAGGATTCTTCCGCTCGCATGTCACGAGCTGTGCACTGAAGGCTCCTGTACGCGTTATCTCAAGACTGACTACAGCATCAAGTGCGAAGGCGACAAGTATGAGTTTGTCAAGATTTTTGCCTTCGGGGCGTCTTCGTACATCGTTTTGCTTCCGGCGCTAGTATTTGTGGCTTTATGGAAACACAGAAGACAGCAACGTCTTCGCGCGCGTTCTGGTGCTGAAGACACGGAGCGGGGTAACACGGTGGGTGCTGAATTTGGTGATTACAATGTCACTGAAATGGCTGAGGAAAATACTGAAGACATCAAAGATGACGTTGAAGATGATGAGCAGACACCCAATGAATCAGAGCTCATTGCTGGGATGAGCTTTCTCTACGAGAACTACAATGATGATGCATGGTATTGGGAACTAGTAGAGGTGATAAGGAAGCTCGTTCTGACTTGTGGGATTATCCTGATTGGCCGAGAGAGCAGAGCTTACGTCGGTCTGGCCTCCATCTGTTCCGGGCTGTTCGCTATTGTTTATGCCTTCCGTAAACCAATCAGGGATGAATTTGAAGACAAACTCCAGCTCACCTCTCTGCTTGTAATATTCCTGAACCTTGGCATTGGAGTAATTCTGAAGATACCAAAAGAGTCAGTTCCCTCAGATGTGGACCAATATGTCGATTCGCTGTTGGTTAATATTCTTGTCGTTGGCGCGAATGTCTTGGTTATTGTGCTGGTTGTTGGTCGTTATATTGCCGTGTTGATTCGCAATATCGTGTTGTGGCGAAGAAATCCCCAGTGCTCCGCGGCCTGCTGTATCACCATGTTTCTTTCCTTGAACGAATTAAGCAGCGGCGTGAATTCTGTGACAGGAGGCATGCGCAAAACTGCCCTCAGAACGAACCTGGGAATTGGAGGTGTGGATATGCCTTCCATGCGTGCAGCTGTGAATGATAATGTTGGTTTTGAAATAGAAGAAAACGACGACAGAGATACAAAAGACAAAAAAGACGGAGGGAGTTGTAAAAAGGCTGCCAGTTCGATGAAGAAAGAGGAAAGTGTCAACGAAGATAATACAATCCAACAAGGGCGCAGGTTCAGCAGTCGATTTCCATCGAGACGAACAAGAGTTTTGGATTCTTAGGGCATACTGAATAGTGTTCATGGCTTTTAAGGAAGTGTGTACATGTCCTTTAATTATGACACAGCATTTTAGATTTTAGGGTGAAGTACGAATCAAGTTCATAAAGAGTGTGTTCCCCACCCCAACCCACCCCCATTACAAGC

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13855	LRR_8	Leucine rich repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR001611	Repeat	Leucine-rich repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11319	G PROTEIN-COUPLED RECEPTOR-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan