Gene detail

Detailed information of gfas1.m1.5637.m1 in Galaxea fascicularis

Genomic Location: Sc0000325:74542...79593
NR annotation: RMX36785.1, hypothetical protein pdam_00009001 [Pocillopora damicornis]
Species Galaxea fascicularis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P02412	Large ribosomal subunit protein eL18B OS=Xenopus laevis OX=8355 GN=rpl18-b PE=2 SV=4
Q5E973	Large ribosomal subunit protein eL18 OS=Bos taurus OX=9913 GN=RPL18 PE=2 SV=3
Q90YV0	Large ribosomal subunit protein eL18 OS=Ictalurus punctatus OX=7998 GN=rpl18 PE=2 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006337 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17135 all species →	Ribosomal_L18	Ribosomal protein 60S L18 and 50S L18e	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036227 all species →	Homologous_superfamily	Large ribosomal subunit protein uL15/eL18 superfamily	Interproscan
IPR021131 all species →	Domain	Large ribosomal subunit protein uL15/eL18	Interproscan
IPR021132 all species →	Conserved_site	Large ribosomal subunit protein eL18, conserved site	Interproscan
IPR000039 all species →	Family	Large ribosomal subunit protein eL18	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10934 all species →	60S RIBOSOMAL PROTEIN L18	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0022625 all species →	Cellular Component	cytosolic large ribosomal subunit	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02883	RP-L18e, RPL18; large subunit ribosomal protein L18e	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.