Detailed information of gfas1.m1.5662.m1 in Galaxea fascicularis

Genomic Location: Sc0000327:1778...36014
NR annotation: XP_044184150.1, DNA mismatch repair protein Msh6-like isoform X1 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
E1BYJ2DNA mismatch repair protein Msh6 OS=Gallus gallus OX=9031 GN=MSH6 PE=3 SV=2
P52701DNA mismatch repair protein Msh6 OS=Homo sapiens OX=9606 GN=MSH6 PE=1 SV=2
P54276DNA mismatch repair protein Msh6 OS=Mus musculus OX=10090 GN=Msh6 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01624MutS_IMutS domain IDomainInterproscan
PF05188MutS_IIMutS domain IIDomainInterproscan
PF05190MutS_IVMutS family domain IVDomainInterproscan
PF00855PWWPPWWP domainDomainInterproscan
PF00488MutS_VMutS domain VDomainInterproscan
PF05192MutS_IIIMutS domain IIIDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036678Homologous_superfamilyMutS, connector domain superfamilyInterproscan
IPR007696DomainDNA mismatch repair protein MutS, coreInterproscan
IPR007695DomainDNA mismatch repair protein MutS-like, N-terminalInterproscan
IPR016151Homologous_superfamilyDNA mismatch repair protein MutS, N-terminalInterproscan
IPR036187Homologous_superfamilyDNA mismatch repair protein MutS, core domain superfamilyInterproscan
IPR000432DomainDNA mismatch repair protein MutS, C-terminalInterproscan
IPR017261FamilyDNA mismatch repair protein MutS/MSHInterproscan
IPR000313DomainPWWP domainInterproscan
IPR007860DomainDNA mismatch repair protein MutS, connector domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR007861DomainDNA mismatch repair protein MutS, clampInterproscan
IPR045076FamilyDNA mismatch repair MutS familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11361DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006298Biological Processmismatch repairInterproscan
GO:0030983Molecular Functionmismatched DNA bindingInterproscan
GO:0003690Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0032301Cellular ComponentMutSalpha complexInterproscan
GO:0140664Molecular FunctionATP-dependent DNA damage sensor activityInterproscan

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