Detailed information of gfas1.m1.6016.m1 in Galaxea fascicularis

Genomic Location: Sc0000361:9481...36514
NR annotation: CAH3041372.1, unnamed protein product [Porites lobata]
Species Galaxea fascicularis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q02410Amyloid-beta A4 precursor protein-binding family A member 1 OS=Homo sapiens OX=9606 GN=APBA1 PE=1 SV=3
B2RUJ5Amyloid-beta A4 precursor protein-binding family A member 1 OS=Mus musculus OX=10090 GN=Apba1 PE=1 SV=2
O35430Amyloid-beta A4 precursor protein-binding family A member 1 OS=Rattus norvegicus OX=10116 GN=Apba1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002950 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00640
all species →		PIDPhosphotyrosine interaction domain (PTB/PID)DomainInterproscan
PF00595
all species →		PDZPDZ domainDomainInterproscan
PF17820
all species →		PDZ_6PDZ domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001478
all species →		DomainPDZ domainInterproscan
IPR036034
all species →		Homologous_superfamilyPDZ superfamilyInterproscan
IPR051230
all species →		FamilyAmyloid-beta A4 Precursor Protein-BindingInterproscan
IPR006020
all species →		DomainPTB/PI domainInterproscan
IPR011993
all species →		Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR041489
all species →		DomainPDZ domain 6Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12345
all species →		SYNTENIN RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0007268
all species →		Biological Processchemical synaptic transmissionInterproscan
GO:0043197
all species →		Cellular Componentdendritic spineInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gfas1.m1.6016.m1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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