Detailed information of gfas1.m1.6025.m1 in Galaxea fascicularis

Genomic Location: Sc0000362:58700...102448
NR annotation: CAH3113719.1, unnamed protein product, partial [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6V4S5Protein sidekick-2 OS=Mus musculus OX=10090 GN=Sdk2 PE=1 SV=1
Q58EX2Protein sidekick-2 OS=Homo sapiens OX=9606 GN=SDK2 PE=1 SV=3
D8VNS8Ryncolin-2 OS=Cerberus rynchops OX=46267 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00041fn3Fibronectin type III domainDomainInterproscan
PF07534TLDTLDDomainInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF00754F5_F8_type_CF5/8 type C domainDomainInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF07885Ion_trans_2Ion channelFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR006571DomainTLDc domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR013099DomainPotassium channel domainInterproscan
IPR020837Conserved_siteFibrinogen, conserved siteInterproscan
IPR001759FamilyPentraxin-relatedInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44170PROTEIN SIDEKICKInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K16353SDK; protein sidekick-Cell adhesion moleculesko04515deepkoala

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