Gene detail

Detailed information of gfas1.m1.6462.m1 in Galaxea fascicularis

Genomic Location: Sc0000410:68149...90000
NR annotation: CAH3174746.1, unnamed protein product [Porites evermanni]
Species Galaxea fascicularis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

gfas1.m1.6462.m1

GCTTAACAATTATAATGTGGAGTATAACGCAGCGGTTCAGTCTCCCAATGTACACTGTACAAACCACTGATTGAACACCACAGATCACATGCTTCACTGAGCATTTCAACCAACACACAAAAGTATAATAATAGTTAATCACTACACTACAAATGAAGAACACAATTTCAACAAACCTGTTCTGTGCTGCAGTTCCTCCCTTGTTAGCACCTTTTATTCTTTTTCCTCTTCGTTCCTCCGAGGCCCTTACTTCTGCAAAGTCTCTGCCTGAAATAACAGACCCTTGACTTGCCTGAGGTCTTGGACGAGGTGCAAAAGTGATATCAACATCAAGTTGACGTGCTTGGCGAGCTTGTGACTTTGTTAAGTTTCCAGAGTGCTTTGACGCACGATGAGCTTGAAGGTCAACCTTTGTTCGGTAGACTGATGTATACTGCTCATGAATACAGTCTCCCTCTTCACAAAGGAAGTGGAAATCACGGAAGTGAACTCGGAGGTTTTCGTAGTTGGAATAATAATCTTGACTACCATCACGCTCGCAAAAGTGGCACCAAAAATGATTCTTGCGAAGGTGCTTGTGCAGCTCATCATTGTCAAGGTAACGCTCATCACAAAATTCACACAAAGGATGACCCTTATGTGATTTGTCATCTTCATCCCCAATTCTACGGTGCCGTGCCAGTTCTGGACGAGTGTATGTTTTTAACTCCCAAGAAAACTTACGCAAGTGGGCAACACAAATATCACAAAAGTACTTTTCATGATCCCTTTTGACATGATCTCGCAGACGACCAAAAAACCTGTCTGGCGCTCGCTTTGGACAAAATGGGCAGTGGTGCTCCAGAAGTTGTTTCACATTGACTTGGATTTCCTTTTGCTGGTAAAGGACACCCTTTTGTCTATCTGCCACAAAGAGGCCCTTTTTTGCAGAGAGCTTTTCAAAGCTAGCGACCTCATCAGTCAGGAATACCTTTTGAATAGCAATAATGAAGAGAAGTGGTTAAAACTGAAAAAAACACTGTTCAGCAATTTTAGATAGAATGGTCACCTTCATAAATCCACCAATCAGCGTGCACATGCACCTCTGTTTGACTATTTAACTCCTTGAGGCAAAAATTTGTTGCTTTCCGAGTTGTCAGCTACTGAACGAAATGCAGTCAAACTCGAAAATAACAGCCATTTAATCAAAGAATAAACCGGCCACATAAAAACCTAAACTTGAACTCATGGAAAAGCTAGACGCTGATTGGCCGCAAAGAACAATAATGGAATATCACAGGCCACAAAATTGACAAATAGCAGAAAAAACCGTAACCTTTGTAATGGGTTCACGTGTTATCAAATGAGTATGGAAATAAAGTCATCTCACACAATAAATCGTAGAACTAGCTAGAATCATTGACATAGTCCACCTCTCTAGACAAAACACACTGCAAAACAATCGATGCAGCATGAAATAACACTTCAGGAAAGTGTCTCAACTTCACCGGAAATTTAACATCATCAGCATTTATCAGGACTATGAAACTGTCATTATGTAATTGTAAACTGTCCTCGAAAAGCCATAAGACACTAATATACCTGTTAGAGGAAGCGATTTCCCTAAATAGCTGAGGCAAATTAAAACATGATTTTACGCAATTATTGAAATCGAAACTAATAATAAAGGATTAAAGCTGGCTAACAAGGTCTAAGAGCGCTATCTCGGCTCAAATTGCGCGGTGTTAAGGATTCCGAAATTTTTATGTTTATTCCAAGCTTCTGCGACTCATTTTGTCTTTCTTACCTGCTTTAATTCCGTTCGGCAAACGGGACAATAGGTCTCTTTTCCCAACACACGCATTCGAATACAACACTTGTGGCACACCGAATGGTCGCAAACTCCGATTGCGTAAAATTCGATGTCCTCGCAACAAACAACGCAAAGACAGACGGAATCCTTTCGACTAGGTTTAGAACTCATCTTTCTTGAGAAGAAGGCAAGATATATATAGGAAAGAGAAGCGAAAACGCGATCAGAATCTACCGGTCAAACTGCACACCAAAATGGCCGCTAACCCAAGGCTCATGCCCAAATTTAGCTTTGCCATTGCGTCATAAACGAGACACATGAGCAACACCGGAAGTCACTGGAAGCGCGTGGGACGTGGAATGAACACGCGTTACTGTTAAACAGCGGATGTTTGCTAAAAACTATTATGGTCTGCTTTCACCGGTTCCGTACAAGTGGCGAAAATGCTACCTTTGTGGAGAAATGCACCGTCAGTTTCGAGGAGTTTGAGCTGCAAAACATCACCTGTGAAGAGATTGTATGCATATGCTGCTTCTCCTTTGAACGAGCCGTTGTCGGATTTCCAAACGGGAAGTGCGGACACTGCTGATCTTTCTCGTCAACCAGTCCAGGTTTCTACTTTGGAAAATGGTCTCAGGGTAGTTTCACTGGAAACACATTCTCCCAAGAGTAGAGTAGGATTATTTATCAATGCTGCTAGTCGCCATGAGACACCAAGCACATTGGGTATCACTCACATGCTGCGCAGTGCTGCATTTTTGGGTAATGATCAACGTTCAGGATTCGTAATTGCAAGAGGACTTCAACACAGTGGTGCAAGTCTAGAGGAATTTGTTATTGAAAATCTGGCCAGCATTGTGAATGAACCAGCATTTTACCCATGGGAGCTTGAGAGGGCAGTCAAGCATTTAAAGCAAGATATTGCAATGAAGGACACCCAGCCACAAACAAATGTAGTGGAGGAGTTGCACAGAATTGCCTTCAGAAAAACATTGGGAAATTCCCTTTACTGCTTACCTCACAGAACTGGTGCATTTAGCCCTGACTTGCTGAAAAGCTACACCAGTGAGTGTTATGTTGGAAAGCGCTTGGCTCTTGTAGGAGTGGGTGTTGATCATGGTCAGTTGGTTGGCTTAGCTGAGGCAGCATTCTCATTTCTCCCCCAAGGGGAAGCTGCTCCAAACGAACCTACTAAGTATCATGGAGGAGAAGTGATGAACTTTAGGCCTGGACCACTTGTGCATGCCATTATTGCCACAGAGGGACCAAGGCTGTTGAAGGCTGCAGCGGAATCCACCGATGGACCGTGTGCAGCATCGGCTTTCAGTGCTAGCTATTCTGATGGTGGCCTGTTTGGATGTTATGTTGTTGCAGACGGAGCAAATGCTCCCAAGGTGATGAAGGCTGTAGTGGGGCAGTTCTCCAAGGCTTCCAAAGGAGACATCTCTGATAAAGATGTGACACGAGCAAAGAACCAGATGAAGGCGCACCTGCTCATGAACAGTGAAAGCCAGGATACGCTGTTTGAGGACATTGGCACCCAGGTACTAACCAAGGGAAGTTACACATCACCCGAAGAAGTCGCCACTGCAGTTGACTCCATCACAAAGAACGACATTTTGACGGTTGCTAAACGCGTGTTCTCTGGCAAGCCAACCCTATCCGCTGCGGGAGACGTATCTTCAGTTCTGGGTTTGGACGAACTCTTCTGATTCTGTTCTTGTTTGTACGCGTTTCCATTAATTGTATGGTGGTGTGTTAATGATGCTAAGCCATCGGTATAGACTTATTATTTTTAACTTGGCTGATTGTTCTTGGCACCAGTGGCTTGTTGCAAAAAGGTGAATGTTGATGAATAAATACGTTGCCTCCTTGGCCCTTTTAACTAGCA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9ZU25	Probable mitochondrial-processing peptidase subunit alpha-1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MPPalpha1 PE=1 SV=1
Q86A84	Mitochondrial-processing peptidase subunit alpha-1 OS=Dictyostelium discoideum OX=44689 GN=mppA1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006991 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00675 all species →	Peptidase_M16	Insulinase (Peptidase family M16)	Family	Interproscan
PF05193 all species →	Peptidase_M16_C	Peptidase M16 inactive domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050361 all species →	Family	Mitochondrial Processing Peptidase/Ubiquinol-cytochrome c Reductase Complex	Interproscan
IPR011765 all species →	Domain	Peptidase M16, N-terminal	Interproscan
IPR011249 all species →	Homologous_superfamily	Metalloenzyme, LuxS/M16 peptidase-like	Interproscan
IPR007863 all species →	Domain	Peptidase M16, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11851 all species →	METALLOPROTEASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00415	QCR2, UQCRC2; ubiquinol-cytochrome c reductase core subunit 2	-	Peptidases and inhibitors	ko01002	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.